RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 FCN1O00602 326 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 PPIAL4GP0DN37 164 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 RPL27AP46776 148 aaKnown RBP9□□□□□ -0.97
CHMP3-209ENST00000494623 TCL1AP56279 114 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 PKIAP61925 76 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 SLC35B1P78383 322 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF841Q6ZN19 808 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 TEX45Q8NA69 505 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 TMEM68Q96MH6 324 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 TNFRSF19Q9NS68 423 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 LRBAP50851 2863 aa9□□□□□ -0.97
CHMP3-209ENST00000494623 IGHV1-3A0A0C4DH29 117 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 SIAH2O43255 324 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 MFAP2P55001 183 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 LINC00305Q7Z4B0 112 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 OR1B1Q8NGR6 318 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 TACC2O95359 2948 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 C22orf46C9J442 243 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 TSTD3H0UI37 97 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 LY6HO94772 140 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 GCGP01275 180 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 IGLV2-8P01709 118 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 CLEC7AQ9BXN2 247 aa8.99□□□□□ -0.97
CHMP3-209ENST00000494623 AMMECR1Q9Y4X0 333 aaPredicted RBP8.99□□□□□ -0.97
CHMP3-209ENST00000494623 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 SNURFLB1AK76 121 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 SELENOTP62341 195 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 SIGLEC9Q9Y336 463 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 ABCA4P78363 2273 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 RANP62826 216 aaKnown RBP8.98□□□□□ -0.97
CHMP3-209ENST00000494623 CDSNQ15517 529 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF672Q499Z4 452 aaPredicted RBP8.98□□□□□ -0.97
CHMP3-209ENST00000494623 IBA57Q5T440 356 aaKnown RBP8.98□□□□□ -0.97
CHMP3-209ENST00000494623 ETFRF1Q6IPR1 90 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 ST6GALNAC3Q8NDV1 305 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 BLNKQ8WV28 456 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 TNFRSF14Q92956 283 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 RPEQ96AT9 228 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 IGF2BP2-AS1Q96M15 143 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 FBXL15Q9H469 300 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
CHMP3-209ENST00000494623 OSTCQ9NRP0 149 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 ONECUT1Q9UBC0 465 aa8.98□□□□□ -0.97
CHMP3-209ENST00000494623 CRYGBP07316 175 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 CRISP2P16562 243 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 DDTP30046 118 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 CA7P43166 264 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 UNQ6494/PRO21346Q6UXR6 183 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF329Q86UD4 541 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 PPP1R27Q86WC6 154 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 FXYD5Q96DB9 178 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 NBASA2RRP1 2371 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 ISLRO14498 428 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 FSTL3O95633 263 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 CA1P00915 261 aaPredicted RBP8.97□□□□□ -0.97
CHMP3-209ENST00000494623 RAB4BP61018 213 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 RAXQ9Y2V3 346 aa8.97□□□□□ -0.97
CHMP3-209ENST00000494623 CRYGCP07315 174 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 COMPP49747 757 aaPredicted RBP8.96□□□□□ -0.97
CHMP3-209ENST00000494623 GNG5P63218 68 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 PLGLAQ15195 96 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 CMTM2Q8TAZ6 248 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 C22orf15Q8WYQ4 148 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 C14orf144Q96I85 54 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 SGK494Q96LW2 274 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 NAT8BQ9UHF3 227 aa8.96□□□□□ -0.97
CHMP3-209ENST00000494623 TAS2R60P59551 318 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 CX3CL1P78423 397 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 KIAA1644Q3SXP7 199 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 BAGE2Q86Y30 109 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 OR8B3Q8NGG8 313 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 IGFBPL1Q8WX77 278 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 FAM168AQ92567 244 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 PERPQ96FX8 193 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 MS4A10Q96PG2 267 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 OR8B2Q96RD0 313 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 SSBP3Q9BWW4 388 aaPredicted RBP8.96□□□□□ -0.98
CHMP3-209ENST00000494623 CDC42EP3Q9UKI2 254 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 TP53TG3Q9ULZ0 132 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 MSRB2Q9Y3D2 182 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 ABCA1O95477 2261 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 PEX7O00628 323 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 ARF6P62330 175 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 MRPL54Q6P161 138 aaKnown RBP8.96□□□□□ -0.98
CHMP3-209ENST00000494623 BEND2Q8NDZ0 799 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 RPH3ALQ9UNE2 315 aa8.96□□□□□ -0.98
CHMP3-209ENST00000494623 PGPA6NDG6 321 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 F2Z2F3 143 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 H3BTX0 84 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 HAX1O00165 279 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 CD33P20138 364 aa8.95□□□□□ -0.98
CHMP3-209ENST00000494623 LEMD1Q68G75 181 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms