RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZNF486Q96H40 463 aaPredicted RBP6.95□□□□□ -1.3
UBR4-216ENST00000494503 LINC00052Q96N35 136 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 PBDC1Q9BVG4 233 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 SCRT1Q9BWW7 348 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
UBR4-216ENST00000494503 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 A0A0G2JRQ6 117 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 FAM90A26D6RGX4 464 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 IGKV1-17P01599 117 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 AMBPP02760 352 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 CD3DP04234 171 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 HTR2BP41595 481 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 RND3P61587 244 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 VBP1P61758 197 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 NCS1P62166 190 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 DHODHQ02127 395 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 SIGLEC15Q6ZMC9 328 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 SLC24A4Q8NFF2 622 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 OR1S2Q8NGQ3 325 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 OR13C8Q8NGS7 320 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 COQ8AQ8NI60 647 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 ZFAND1Q8TCF1 268 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 KLK11Q9UBX7 282 aa6.94□□□□□ -1.3
UBR4-216ENST00000494503 C14orf166Q9Y224 244 aaKnown RBP6.94□□□□□ -1.3
UBR4-216ENST00000494503 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 GSTZ1O43708 216 aaPredicted RBP6.93□□□□□ -1.3
UBR4-216ENST00000494503 OR5AC1P0C628 307 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 IGLC1P0CG04 106 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 SPART-AS1P0CW21 52 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 SPCS3P61009 180 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 USF2Q15853 346 aaPredicted RBP6.93□□□□□ -1.3
UBR4-216ENST00000494503 ETFRF1Q6IPR1 90 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 MZT2AQ6P582 158 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 C16orf54Q6UWD8 224 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 ARRDC1Q8N5I2 433 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 CSNK1G2-AS1Q8NCQ2 148 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 OR4B1Q8NGF8 309 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 MARCH1Q8TCQ1 289 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 GLMPQ8WWB7 406 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 PPP1R14BQ96C90 147 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 YIPF6Q96EC8 236 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 C7orf50Q9BRJ6 194 aaKnown RBP6.93□□□□□ -1.3
UBR4-216ENST00000494503 NRN1Q9NPD7 142 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.93□□□□□ -1.3
UBR4-216ENST00000494503 EXTL2Q9UBQ6 330 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 CACNG5Q9UF02 275 aa6.93□□□□□ -1.3
UBR4-216ENST00000494503 A0A087WXM4 84 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 INS-IGF2F8WCM5 200 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 RAB3DO95716 219 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 RD3LP0DJH9 198 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 SLC25A4P12235 298 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 RPL5P46777 297 aaKnown RBP6.92□□□□□ -1.3
UBR4-216ENST00000494503 RORCP51449 518 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 DEFB1P60022 68 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 MEF2DQ14814 521 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 SOHLH1Q5JUK2 328 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 PRSS54Q6PEW0 395 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 OR4D10Q8NGI6 311 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 OR51G1Q8NGK1 321 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 OR52I2Q8NH67 350 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 AP3S1Q92572 193 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 NPIPB3Q92617 1050 aa6.92□□□□□ -1.3
UBR4-216ENST00000494503 ZFP92A6NM28 416 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 H3BMM0 161 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 P0C879 139 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 HLA-DRB4P13762 266 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 TBPP20226 339 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 UCP1P25874 307 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 ID1P41134 155 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 TAS2R19P59542 299 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 YPEL3P61236 119 aaPredicted RBP6.91□□□□□ -1.3
UBR4-216ENST00000494503 TMEM268Q5VZI3 342 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 FAAP20Q6NZ36 180 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 Q6ZRM9 215 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 LHFPL1Q86WI0 220 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 FAM219AQ8IW50 185 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 TERB2Q8NHR7 220 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 RNASEH2CQ8TDP1 164 aaKnown RBP6.91□□□□□ -1.3
UBR4-216ENST00000494503 RBPMSQ93062 196 aaKnown RBP6.91□□□□□ -1.3
UBR4-216ENST00000494503 TMEM208Q9BTX3 173 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 FUNDC2Q9BWH2 189 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 PFDN2Q9UHV9 154 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 PAIP2BQ9ULR5 123 aaKnown RBP6.91□□□□□ -1.3
UBR4-216ENST00000494503 HLA-DRB4X5D2U9 266 aa6.91□□□□□ -1.3
UBR4-216ENST00000494503 A0A1B0GVY2 172 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 TMEM189A5PLL7 270 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 RTL8CO15255 209 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 RGS5O15539 181 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 B3GALNT1O75752 331 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 TOMM40O96008 361 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 PSG1P11464 419 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 NUP62P37198 522 aaPredicted RBP6.9□□□□□ -1.3
UBR4-216ENST00000494503 LYZP61626 148 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 C2orf83Q53S99 150 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 GDF5OSQ5U4N7 250 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 STEAP1BQ6NZ63 245 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 GSG1LQ6UXU4 331 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 NOXA1Q86UR1 476 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms