RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ZNF469Q96JG9 3925 aaPredicted RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 ZANQ9Y493 2812 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 ELOA3CA0A087WX78 387 aaPredicted RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 SMCO3A2RU48 225 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 LINC01548A6NM66 108 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 BCL2P10415 239 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 HIST1H1BP16401 226 aaKnown RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 PPIFP30405 207 aaKnown RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 CDC34P49427 236 aaPredicted RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 PPT1P50897 306 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 RND2P52198 227 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 ELLP55199 621 aaPredicted RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 YPEL3P61236 119 aaPredicted RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 RHOBP62745 196 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 GNB1P62873 340 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 CFHR3Q02985 330 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 AKR1C1Q04828 323 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 ZNF343Q6P1L6 599 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 RBMS3Q6XE24 437 aaKnown RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 Q6YL49 198 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 C19orf35Q6ZS72 473 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 WFDC11Q8NEX6 87 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 NANPQ8TBE9 248 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 ABHD5Q8WTS1 349 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 MRPL32Q9BYC8 188 aaKnown RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 DNAJC4Q9NNZ3 241 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 MRPL27Q9P0M9 148 aaKnown RBP5.32□□□□□ -1.56
MSH5-217ENST00000494458 VAX2Q9UIW0 290 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 PITPNC1Q9UKF7 332 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 FUT9Q9Y231 359 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 FAM96BQ9Y3D0 163 aa5.32□□□□□ -1.56
MSH5-217ENST00000494458 ITPR2Q14571 2701 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 IGHV3OR16-10A0A075B7F0 116 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 TRAV30A0A087WSZ9 112 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 WI2-2373I1.2A0A1W2PRP0 233 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 TMEM250H0YL14 139 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 H3BUA1 57 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 OR2C1O95371 312 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 CXorf1O96002 111 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 SFTA3P0C7M3 94 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 GATA2P23769 480 aaPredicted RBP5.31□□□□□ -1.56
MSH5-217ENST00000494458 CD81P60033 236 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 ZNF90Q03938 601 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 DEFB112Q30KQ8 113 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 FAM90A2PQ658T7 463 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 FAM122CQ6P4D5 195 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 LCN15Q6UWW0 184 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 CCDC28AQ8IWP9 274 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 CIARTQ8N365 385 aaPredicted RBP5.31□□□□□ -1.56
MSH5-217ENST00000494458 TEX29Q8N6K0 151 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 MAPK1IP1LQ8NDC0 245 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 OR5R1Q8NH85 324 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 MISP3Q96FF7 219 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 FAM103A1Q9BTL3 118 aaKnown RBP5.31□□□□□ -1.56
MSH5-217ENST00000494458 SLC25A22Q9H936 323 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 MANBALQ9NQG1 85 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 TNFRSF19Q9NS68 423 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 THYN1Q9P016 225 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 ABCA1O95477 2261 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 CREBBPQ92793 2442 aa5.31□□□□□ -1.56
MSH5-217ENST00000494458 CSPG4Q6UVK1 2322 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
MSH5-217ENST00000494458 GCN1Q92616 2671 aaKnown RBP5.3□□□□□ -1.56
MSH5-217ENST00000494458 A0A1W2PPV4 95 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TMEM89A2RUT3 159 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 H3BUX3 64 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 ATP6V0E1O15342 81 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 NDUFB8O95169 186 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TOMM40O96008 361 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 IGLV1-40P01703 118 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 CTSGP08311 255 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 C8orf88P0DMB2 117 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 DEFA4P12838 97 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 NPBWR1P48145 328 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 FGF8P55075 233 aaPredicted RBP5.3□□□□□ -1.56
MSH5-217ENST00000494458 MFAP4P55083 255 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 GUCA2BQ16661 112 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 HAGHQ16775 308 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 SPATA31B1PQ5VZV4 182 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 SPNS3Q6ZMD2 512 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 PQLC2Q6ZP29 291 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 BCL6BQ8N143 479 aaPredicted RBP5.3□□□□□ -1.56
MSH5-217ENST00000494458 Q8N2B8 174 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 SVBPQ8N300 66 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TMEM86BQ8N661 226 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 ZNF491Q8N8L2 437 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 NECAP1Q8NC96 275 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 OR1L4Q8NGR5 311 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 ZNF502Q8TBZ5 544 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 ACY3Q96HD9 319 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 PFDN5Q99471 154 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 EIF5A2Q9GZV4 153 aaKnown RBP5.3□□□□□ -1.56
MSH5-217ENST00000494458 TMPRSS5Q9H3S3 457 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TREM1Q9NP99 234 aa5.3□□□□□ -1.56
MSH5-217ENST00000494458 TMEM160Q9NX00 188 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms