RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZFP92A6NM28 416 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 OVOL1O14753 267 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 EWSR1Q01844 656 aaKnown RBP eCLIP11.17□□□□□ -0.62
BRCA1-223ENST00000494123 ARL16Q0P5N6 197 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-223ENST00000494123 PRR31Q5SQ13 230 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 C1QL4Q86Z23 238 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 OR1S2Q8NGQ3 325 aa11.17□□□□□ -0.62
BRCA1-223ENST00000494123 ZNF320A2RRD8 509 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 YIF1AO95070 293 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 LYL1P12980 280 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 RPL12P30050 165 aaKnown RBP11.16□□□□□ -0.62
BRCA1-223ENST00000494123 S100A11P31949 105 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 NUP62P37198 522 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-223ENST00000494123 BAXQ07812 192 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 TIGITQ495A1 244 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 GPHB5Q86YW7 130 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
BRCA1-223ENST00000494123 VWFP04275 2813 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 FXYD6-FXYD2A0A087WZ82 144 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 FNDC10F2Z333 226 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 NDUFA4O00483 81 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 NHLH2Q02577 135 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 Q5BKY6 102 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 NPVFQ9HCQ7 196 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
BRCA1-223ENST00000494123 A0A1B0GVG6 124 aa11.14□□□□□ -0.63
BRCA1-223ENST00000494123 FABP1P07148 127 aa11.14□□□□□ -0.63
BRCA1-223ENST00000494123 OR5C1Q8NGR4 320 aa11.14□□□□□ -0.63
BRCA1-223ENST00000494123 C20orf24Q9BUV8 137 aa11.14□□□□□ -0.63
BRCA1-223ENST00000494123 ELOVL1Q9BW60 279 aa11.14□□□□□ -0.63
BRCA1-223ENST00000494123 SMLR1H3BR10 107 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 LGALS9O00182 355 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 IGKV1-17P01599 117 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 INO80EQ8NBZ0 244 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-223ENST00000494123 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 OR9G4Q8NGQ1 327 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 RCC1LQ96I51 464 aaKnown RBP11.13□□□□□ -0.63
BRCA1-223ENST00000494123 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
BRCA1-223ENST00000494123 TMEM147Q9BVK8 224 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 UQCC1Q9NVA1 299 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 HSPB11Q9Y547 144 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 PUS1Q9Y606 427 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCA1-223ENST00000494123 YPEL3P61236 119 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-223ENST00000494123 CLINT1Q14677 625 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 ZNF546Q86UE3 836 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 AKAP14Q86UN6 197 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 Q8WTZ3 238 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 TMEM190Q8WZ59 177 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 TRGV9Q99603 122 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
BRCA1-223ENST00000494123 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 UBE2L5PA0A1B0GUS4 154 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 RD3LP0DJH9 198 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 TOMM20LQ6UXN7 152 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 GINS3Q9BRX5 216 aa11.12□□□□□ -0.63
BRCA1-223ENST00000494123 IGKV1D-37A0A075B6S9 117 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 A8MWP6 167 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 G3V3Q6 166 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 SAP30O75446 220 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 TOMM40O96008 361 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 ZNF90Q03938 601 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 DAZ1Q9NQZ3 744 aaKnown RBP11.11□□□□□ -0.63
BRCA1-223ENST00000494123 TRRAPQ9Y4A5 3859 aa11.11□□□□□ -0.63
BRCA1-223ENST00000494123 DFFBO76075 338 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 PSG1P11464 419 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 IGLL1P15814 213 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 ELLP55199 621 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-223ENST00000494123 OR2F1Q13607 317 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 RAB31Q13636 194 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 VWC2Q2TAL6 325 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 TM4SF20Q53R12 229 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 ST6GAL2Q96JF0 529 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 GPR61Q9BZJ8 451 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 TNFSF18Q9UNG2 199 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 DNHD1Q96M86 4753 aa11.1□□□□□ -0.63
BRCA1-223ENST00000494123 PKD1L1Q8TDX9 2849 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 ARPC5O15511 151 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 ZNF207O43670 478 aaKnown RBP11.09□□□□□ -0.63
BRCA1-223ENST00000494123 IL4P05112 153 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 AP2S1P53680 142 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-223ENST00000494123 CYP2G1PQ6ZSU1 146 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 BPIFCQ8NFQ6 507 aa11.09□□□□□ -0.63
BRCA1-223ENST00000494123 ATP5SQ99766 215 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms