RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 MRPL16Q9NX20 251 aaKnown RBP15.86■□□□□ 0.13
COL27A1-207ENST00000494090 TMEM50AO95807 157 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 CD7P09564 240 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 STAG3L3P0CL85 134 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 ABCA7Q8IZY2 2146 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 RNF5Q99942 180 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 REG4Q9BYZ8 158 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 ZNF318Q5VUA4 2279 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 COLCA2A8K830 154 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 SRRM5B3KS81 715 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 TIMM23O14925 209 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 IFI27P40305 119 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-207ENST00000494090 FAM71F2Q6NXP2 309 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 KLHDC3Q9BQ90 382 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 GNB1LQ9BYB4 327 aa15.86■□□□□ 0.13
COL27A1-207ENST00000494090 QRFPP83859 136 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 RPUSD1Q9UJJ7 312 aaKnown RBP15.85■□□□□ 0.13
COL27A1-207ENST00000494090 TRBV24-1A0A075B6N3 115 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 DTX2Q86UW9 622 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 HTN3P15516 51 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 SRSF4Q08170 494 aaKnown RBP15.85■□□□□ 0.13
COL27A1-207ENST00000494090 MINOS1Q5TGZ0 78 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 TEX38Q6PEX7 206 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 NDUFAF3Q9BU61 184 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 MINOS1-NBL1R4GNA1 71 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 MUC21A0A0G2JKD1 596 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 MUC21A0A140T8X8 626 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 MUC21Q5SSG8 566 aa15.85■□□□□ 0.13
COL27A1-207ENST00000494090 FOXG1P55316 489 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-207ENST00000494090 MTURNQ8N3F0 131 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 IGHV3OR16-8A0A075B7F1 116 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 EMP1P54849 157 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 NMSQ5H8A3 153 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 TREML4Q6UXN2 200 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 TOMM7Q9P0U1 55 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 PYYP10082 97 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 PAX8Q06710 450 aa15.84■□□□□ 0.13
COL27A1-207ENST00000494090 ZNF672Q499Z4 452 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-207ENST00000494090 KIF26BQ2KJY2 2108 aa15.83■□□□□ 0.13
COL27A1-207ENST00000494090 TMEM42Q69YG0 159 aa15.83■□□□□ 0.13
COL27A1-207ENST00000494090 OR5AN1Q8NGI8 311 aa15.83■□□□□ 0.13
COL27A1-207ENST00000494090 VCX2Q9H322 139 aa15.83■□□□□ 0.13
COL27A1-207ENST00000494090 ZDBF2Q9HCK1 2354 aa15.83■□□□□ 0.13
COL27A1-207ENST00000494090 ST6GALNAC6Q969X2 333 aa15.83■□□□□ 0.12
COL27A1-207ENST00000494090 RALGAPA1Q6GYQ0 2036 aa15.83■□□□□ 0.12
COL27A1-207ENST00000494090 GTSCR1Q86UQ5 136 aa15.83■□□□□ 0.12
COL27A1-207ENST00000494090 NXT2Q9NPJ8 142 aaKnown RBP15.83■□□□□ 0.12
COL27A1-207ENST00000494090 PSG8Q9UQ74 426 aa15.83■□□□□ 0.12
COL27A1-207ENST00000494090 HEATR5BQ9P2D3 2071 aa15.83■□□□□ 0.12
COL27A1-207ENST00000494090 C1QL4Q86Z23 238 aa15.83■□□□□ 0.12
COL27A1-207ENST00000494090 TRAV41A0A0B4J266 112 aa15.82■□□□□ 0.12
COL27A1-207ENST00000494090 ZSWIM8A7E2V4 1837 aa15.82■□□□□ 0.12
COL27A1-207ENST00000494090 TRAV40A0A0B4J280 105 aa15.82■□□□□ 0.12
COL27A1-207ENST00000494090 TRBV6-6A0A0A6YYG2 114 aa15.82■□□□□ 0.12
COL27A1-207ENST00000494090 PGPEP1LA6NFU8 196 aa15.82■□□□□ 0.12
COL27A1-207ENST00000494090 MALP21145 153 aa15.82■□□□□ 0.12
COL27A1-207ENST00000494090 SSBP4Q9BWG4 385 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-207ENST00000494090 F2Z2F3 143 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 FOXF2Q12947 444 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 TRBV7-9A0A0J9YWB2 115 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 SNAI2O43623 268 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 SRSF1Q07955 248 aaKnown RBP eCLIP15.81■□□□□ 0.129e-8■□□□□ 11
COL27A1-207ENST00000494090 ORMDL2Q53FV1 153 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 LAMTOR2Q9Y2Q5 125 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 GGTLC1Q9BX51 225 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 CYSLTR1Q9Y271 337 aa15.81■□□□□ 0.12
COL27A1-207ENST00000494090 CXCL1P09341 107 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 LY6DQ14210 128 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 HIST1H2BLQ99880 126 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 IGHV2-26A0A0B4J1V2 119 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 C5orf63A6NC05 138 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 LYNX1G3V0Z9 82 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 LYNX1P0DP58 116 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 TSKUQ8WUA8 353 aa15.8■□□□□ 0.12
COL27A1-207ENST00000494090 SCN5AQ14524 2016 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 TRGV4A0A0C4DH28 118 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 IGKV1-5P01602 117 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 TMEM14EPQ6UXP3 125 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 NUDT11Q96G61 164 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 B4DSR2 109 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 PSPNO60542 156 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 DMRTA1Q5VZB9 504 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 SPSB3Q6PJ21 355 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 GLRX5Q86SX6 157 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 HIST3H2BBQ8N257 126 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 KIR3DL3Q8N743 410 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 LINC00614P0C842 121 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 LYL1P12980 280 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 NIT1Q86X76 327 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 TRAV9-2A0A087WT02 112 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 SLC25A20O43772 301 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 ATP5L2Q7Z4Y8 100 aa15.79■□□□□ 0.12
COL27A1-207ENST00000494090 ZCCHC24Q8N2G6 241 aaKnown RBP15.79■□□□□ 0.12
COL27A1-207ENST00000494090 FOXL1Q12952 345 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 ARTNQ5T4W7 220 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 SIGLEC15Q6ZMC9 328 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 Q6ZS49 121 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 HBDP02042 147 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 FHL1Q13642 323 aa15.78■□□□□ 0.12
COL27A1-207ENST00000494090 LINC01559Q495D7 138 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms