RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 C17orf112F2Z3M2 114 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 AGPAT2O15120 278 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 GNG7O60262 68 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 CFDP00746 253 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-231ENST00000494043 IGLC1P0CG04 106 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 CAMLGP49069 296 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 RAB31Q13636 194 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 LURAP1LQ8IV03 231 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-231ENST00000494043 ZNF491Q8N8L2 437 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 TRGV9Q99603 122 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-231ENST00000494043 SLC25A32Q9H2D1 315 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 GAR1Q9NY12 217 aaKnown RBP8.84□□□□□ -0.99
MCF2L-231ENST00000494043 RNF114Q9Y508 228 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 TIMM9Q9Y5J7 89 aa8.84□□□□□ -0.99
MCF2L-231ENST00000494043 TRAV30A0A087WSZ9 112 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.83□□□□□ -1
MCF2L-231ENST00000494043 TCRBV4S1A1TA0A5B7 111 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 OR2T8A6NH00 312 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 SCGB2A1O75556 95 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 IGKV1-17P01599 117 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 IGHV3-11P01762 117 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 SEC11BP0C7V7 166 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 SPP1P10451 314 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 GPR183P32249 361 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 PROK1P58294 105 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 ZNF90Q03938 601 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 TIGITQ495A1 244 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 TCTEX1D4Q5JR98 221 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 EIF5AL1Q6IS14 154 aaKnown RBP8.83□□□□□ -1
MCF2L-231ENST00000494043 ZNF343Q6P1L6 599 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 CLEC19AQ6UXS0 136 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 CYP2G1PQ6ZSU1 146 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 TMED6Q8WW62 240 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 PHYHIPLQ96FC7 376 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 UBE2E2Q96LR5 201 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 KCNIP2Q9NS61 270 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 SLC45A2Q9UMX9 530 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 RFNGQ9Y644 331 aa8.83□□□□□ -1
MCF2L-231ENST00000494043 SETD2Q9BYW2 2564 aaPredicted RBP8.83□□□□□ -1
MCF2L-231ENST00000494043 A0A1B0GUS0 222 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 NUPL2O15504 423 aaKnown RBP8.82□□□□□ -1
MCF2L-231ENST00000494043 TGOLN2O43493 480 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 CLEC3BP05452 202 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 FABP1P07148 127 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 CTSGP08311 255 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 LGALS1P09382 135 aaKnown RBP8.82□□□□□ -1
MCF2L-231ENST00000494043 RPL29P47914 159 aaKnown RBP8.82□□□□□ -1
MCF2L-231ENST00000494043 IFITM2Q01629 132 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 FAM209BQ5JX69 171 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 MIC13Q5XKP0 118 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 TEX261Q6UWH6 196 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 ALKAL2Q6UX46 152 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 OR2G3Q8NGZ4 309 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 CHRDL1Q9BU40 450 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 GNB4Q9HAV0 340 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 PXMP4Q9Y6I8 212 aa8.82□□□□□ -1
MCF2L-231ENST00000494043 TSPAN15O95858 294 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 TOMM40O96008 361 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 IFNA7P01567 189 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 LINC00869P0C866 280 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 CD28P10747 220 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 ADMP35318 185 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 YPEL3P61236 119 aaPredicted RBP8.81□□□□□ -1
MCF2L-231ENST00000494043 B2MP61769 119 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 SELENOTP62341 195 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 SERF2P84101 59 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 PRR20EP86478 221 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 PRR20CP86479 221 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 PRR20DP86480 221 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 PRR20BP86481 221 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 PRR20AP86496 221 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 FOXL1Q12952 345 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 SPSB3Q6PJ21 355 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 TMEM182Q6ZP80 229 aaPredicted RBP8.81□□□□□ -1
MCF2L-231ENST00000494043 PRIMA1Q86XR5 153 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 STPG3Q8N7X2 389 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 ZNF680Q8NEM1 530 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 BPIFCQ8NFQ6 507 aa8.81□□□□□ -1
MCF2L-231ENST00000494043 ANKRD34BA5PLL1 514 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 PPP5D1E7EU14 171 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 TRBV12-3P01733 135 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 RD3LP0DJH9 198 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 PSG1P11464 419 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 GATA2P23769 480 aaPredicted RBP8.8□□□□□ -1
MCF2L-231ENST00000494043 ARL3P36405 182 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 CDX1P47902 265 aaPredicted RBP8.8□□□□□ -1
MCF2L-231ENST00000494043 ELLP55199 621 aaPredicted RBP8.8□□□□□ -1
MCF2L-231ENST00000494043 ZNF616Q08AN1 781 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 KHDC1LQ5JSQ8 128 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 WFDC12Q8WWY7 111 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 OR5B12Q96R08 314 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
MCF2L-231ENST00000494043 PEF1Q9UBV8 284 aaKnown RBP8.8□□□□□ -1
MCF2L-231ENST00000494043 ATRQ13535 2644 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms