RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 CACNA1BQ00975 2339 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 MSGN1A6NI15 193 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 C15orf61A6NNL5 157 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 SRRM4A7MD48 611 aaKnown RBP5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 CEBPZOSA8MTT3 80 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 LY6HO94772 140 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 SEC11BP0C7V7 166 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 HSPE1P61604 102 aaKnown RBP5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 PAFAH1B2P68402 229 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 ZNF525Q8N782 197 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 TEX45Q8NA69 505 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 NAA38Q9BRA0 125 aaKnown RBP5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 SEC11CQ9BY50 192 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 MRPL20Q9BYC9 149 aaKnown RBP5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 BPESC1Q9GZL8 116 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 TMEM14BQ9NUH8 114 aa5.4□□□□□ -1.55
FNDC3B-212ENST00000494000 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 ODF3BA8MYP8 253 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 INS-IGF2F8WCM5 200 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 LY6LH3BQJ8 138 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 UPK2O00526 184 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 KBTBD11O94819 623 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 REG1AP05451 166 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 RAB5AP20339 215 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 PAX2Q02962 417 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 OR4A47Q6IF82 309 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 SSX7Q7RTT5 188 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 Q8N7P7 452 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 TMEM167AQ8TBQ9 72 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 MALSU1Q96EH3 234 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 Q96MF0 132 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 ATP5SQ99766 215 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 GINS3Q9BRX5 216 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 ZZEF1O43149 2961 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 FAM24AA6NFZ4 105 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 OR11H12B2RN74 326 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 SEC14L6B5MCN3 397 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 MT-CO2P00403 227 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 IGHV3-7P01780 117 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 PLA2G2AP14555 144 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 UBE2E1P51965 193 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 DVL1P1P54792 670 aaPredicted RBP5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 TPTE2P1Q5T6R2 138 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 TMEM14EPQ6UXP3 125 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 LINC00336Q6ZUF6 198 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 PNKDQ8N490 385 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 LFNGQ8NES3 379 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 OR11H1Q8NG94 326 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 OR4P4Q8NGL7 312 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 OR11H2Q8NH07 326 aa5.39□□□□□ -1.55
FNDC3B-212ENST00000494000 YLPM1P49750 1951 aaKnown RBP5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 IGHV1-3A0A0C4DH29 117 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 CENPVL3A0A0U1RRI6 287 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 IGSF23A1L1A6 192 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 UMAD1C9J7I0 102 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 FNDC10F2Z333 226 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 NDUFS7O75251 213 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 OR9G9P0C7N8 305 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 RPL35AP18077 110 aaKnown RBP5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 FGF7P21781 194 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 XGP55808 180 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 NDUFA6P56556 154 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 SELENOTP62341 195 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 RUNX1Q01196 453 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 VAMP3Q15836 100 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 DPPA3Q6W0C5 159 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 C1orf229Q6ZS94 237 aaPredicted RBP5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 OR10P1Q8NGE3 313 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 OR1L8Q8NGR8 309 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 MRAPQ8TCY5 172 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 SCGB1C1Q8TD33 95 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 USP24Q9UPU5 2620 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 DOCK11Q5JSL3 2073 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 NPIPB6E9PJ23 425 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 PRCDQ00LT1 54 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 KIAA0141Q14154 515 aaPredicted RBP5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 RPL7L1Q6DKI1 246 aaKnown RBP5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 VMO1Q7Z5L0 202 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 C1QL4Q86Z23 238 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 MMD2Q8IY49 270 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 COMMD5Q9GZQ3 224 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 OR51B2Q9Y5P1 312 aa5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 TPRP12270 2363 aaKnown RBP5.38□□□□□ -1.55
FNDC3B-212ENST00000494000 C20orf202A1L168 122 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 TMEM213A2RRL7 107 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 ZNF705EA8MWA4 302 aaPredicted RBP5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 MPDU1O75352 247 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 COX7A1P24310 79 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 SULT1A2P50226 295 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 DYNLT3P51808 116 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 SUB1P53999 127 aaKnown RBP eCLIP5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 RPL8P62917 257 aaKnown RBP5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 ERHP84090 104 aaKnown RBP5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 PAX8Q06710 450 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 KHDC3LQ587J8 217 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 SPANXN5Q5MJ07 72 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 FAM90A2PQ658T7 463 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 MOB3BQ86TA1 216 aa5.37□□□□□ -1.55
FNDC3B-212ENST00000494000 OR5C1Q8NGR4 320 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms