RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SOCS1O15524 211 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 NDUFA7O95182 113 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 MT-CO2P00403 227 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 IGLV3-1P01715 115 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 LIPFP07098 398 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 GPX1P07203 203 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 PSG2P11465 335 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 S100GP29377 79 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 ADMP35318 185 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 CEBPDP49716 269 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-234ENST00000493923 HINT1P49773 126 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-234ENST00000493923 KRTDAPP60985 99 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 HERV-K104P61576 105 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 PDCD1Q15116 288 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 Q6ZSV7 163 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 LYZL2Q7Z4W2 148 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 DEFB125Q8N687 156 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 CD177Q8N6Q3 437 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 OR10P1Q8NGE3 313 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 OR51T1Q8NGJ9 327 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 LINC01006Q8NI28 216 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 C8orf46Q8TAG6 207 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 OR51E1Q8TCB6 317 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 MRPL30Q8TCC3 161 aaKnown RBP6.59□□□□□ -1.35
HDAC6-234ENST00000493923 H1FXQ92522 213 aaKnown RBP6.59□□□□□ -1.35
HDAC6-234ENST00000493923 KCNS1Q96KK3 526 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 ATP6V0BQ99437 205 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 CITED1Q99966 193 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 ST20Q9HBF5 79 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 SLC39A9Q9NUM3 307 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 SIGLEC9Q9Y336 463 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 KIAA2026Q5HYC2 2103 aa6.59□□□□□ -1.35
HDAC6-234ENST00000493923 A0A0A6YYD4 124 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 GAGE12BA1L429 117 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 CLPSL1A2RUU4 121 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 H3BSH0 61 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 J3QR89 54 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 HMGB3O15347 200 aaKnown RBP6.58□□□□□ -1.36
HDAC6-234ENST00000493923 NDUFB3O43676 98 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 SYNGR1O43759 233 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 SERF1AO75920 110 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 HLA-DRB1P01911 266 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 PSG1P11464 419 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 TMEM50BP56557 158 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 PROK1P58294 105 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 HLA-DRB5Q30154 266 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 ZNF695Q8IW36 515 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 ZDHHC23Q8IYP9 409 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 TMEM86BQ8N661 226 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 ZNRF1Q8ND25 227 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 OR5A1Q8NGJ0 315 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 OR52M1Q8NGK5 317 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 SSMEM1Q8WWF3 244 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 GPER1Q99527 375 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 PBOV1Q9GZY1 135 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 RPRMQ9NS64 109 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 ZNRD1Q9P1U0 126 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 RNF24Q9Y225 148 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 MPC1Q9Y5U8 109 aa6.58□□□□□ -1.36
HDAC6-234ENST00000493923 ZNF816-ZNF321PA0A0X1KG74 233 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 SERTM2A0A1B0GWG4 89 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 H0Y8G0 127 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 NPFFO15130 113 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 SSSCA1O60232 199 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 TTRP02766 147 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 VDAC1P21796 283 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 BLVRBP30043 206 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-234ENST00000493923 MC5RP33032 325 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 SAA4P35542 130 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 REG1BP48304 166 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 AMTP48728 403 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 SEC11AP67812 179 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 ID3Q02535 119 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 MZT1Q08AG7 82 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 TCTEX1D4Q5JR98 221 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 LCN15Q6UWW0 184 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 CALHM1Q8IU99 346 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 MKXQ8IYA7 352 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 Q8N976 141 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 FER1L6-AS1Q8NA97 138 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 OR10W1Q8NGF6 305 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 OR4F5Q8NH21 305 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 PPP1R35Q8TAP8 253 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 PLPPR1Q8TBJ4 325 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 C10orf35Q96D05 121 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 AP1S3Q96PC3 154 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 RSG1Q9BU20 258 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 GNB1LQ9BYB4 327 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 TMEM222Q9H0R3 208 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
HDAC6-234ENST00000493923 NRN1Q9NPD7 142 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 ZNF581Q9P0T4 197 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 SLC25A10Q9UBX3 287 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-234ENST00000493923 FBXL7Q9UJT9 491 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 PIGLQ9Y2B2 252 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 UBE2J1Q9Y385 318 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-234ENST00000493923 RNF114Q9Y508 228 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms