RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 HOXB5P09067 269 aa16.86■□□□□ 0.29
SNIP1-203ENST00000493916 OR4E1P0C645 316 aa16.86■□□□□ 0.29
SNIP1-203ENST00000493916 OR10J1P30954 320 aa16.86■□□□□ 0.29
SNIP1-203ENST00000493916 DHRS2Q13268 280 aa16.86■□□□□ 0.29
SNIP1-203ENST00000493916 GGNBP1Q5YKI7 109 aa16.86■□□□□ 0.29
SNIP1-203ENST00000493916 ST8SIA2Q92186 375 aa16.86■□□□□ 0.29
SNIP1-203ENST00000493916 NBEAL2Q6ZNJ1 2754 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 IGHV3OR16-13A0A075B7E8 117 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 IGHV3-74A0A0B4J1X5 117 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 PLA2G10O15496 165 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 MED6O75586 246 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 APOHP02749 345 aaPredicted RBP16.85■□□□□ 0.29
SNIP1-203ENST00000493916 YPEL3P61236 119 aaPredicted RBP16.85■□□□□ 0.29
SNIP1-203ENST00000493916 ODF3L2Q3SX64 289 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 LYG2Q86SG7 212 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 COQ8AQ8NI60 647 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 CITED4Q96RK1 184 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 CCDC32Q9BV29 185 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 TMEM231Q9H6L2 316 aa16.85■□□□□ 0.29
SNIP1-203ENST00000493916 NPPCP23582 126 aa16.84■□□□□ 0.29
SNIP1-203ENST00000493916 CRYBB3P26998 211 aa16.84■□□□□ 0.29
SNIP1-203ENST00000493916 NPIPB3Q92617 1050 aa16.84■□□□□ 0.29
SNIP1-203ENST00000493916 METTL26Q96S19 204 aa16.84■□□□□ 0.29
SNIP1-203ENST00000493916 GGTLC1Q9BX51 225 aa16.84■□□□□ 0.29
SNIP1-203ENST00000493916 UBQLN2Q9UHD9 624 aa16.84■□□□□ 0.29
SNIP1-203ENST00000493916 LOC102724200A0A096LPH7 203 aaPredicted RBP16.83■□□□□ 0.28
SNIP1-203ENST00000493916 A6NHS1 94 aa16.83■□□□□ 0.28
SNIP1-203ENST00000493916 LYRM1O43325 122 aa16.83■□□□□ 0.28
SNIP1-203ENST00000493916 IFNA4P05014 189 aa16.83■□□□□ 0.28
SNIP1-203ENST00000493916 ANXA7P20073 488 aaKnown RBP16.83■□□□□ 0.28
SNIP1-203ENST00000493916 GPX4P36969 197 aaPredicted RBP16.83■□□□□ 0.28
SNIP1-203ENST00000493916 TCF24Q7RTU0 167 aa16.83■□□□□ 0.28
SNIP1-203ENST00000493916 ACY3Q96HD9 319 aa16.83■□□□□ 0.28
SNIP1-203ENST00000493916 CIB3Q96Q77 187 aaPredicted RBP16.83■□□□□ 0.28
SNIP1-203ENST00000493916 A0A1W2PS18 150 aa16.82■□□□□ 0.28
SNIP1-203ENST00000493916 IAPPP10997 89 aa16.82■□□□□ 0.28
SNIP1-203ENST00000493916 C4orf46Q504U0 113 aa16.82■□□□□ 0.28
SNIP1-203ENST00000493916 LILRB2Q8N423 598 aa16.82■□□□□ 0.28
SNIP1-203ENST00000493916 Q8WTZ3 238 aa16.82■□□□□ 0.28
SNIP1-203ENST00000493916 C20orf85Q9H1P6 137 aa16.82■□□□□ 0.28
SNIP1-203ENST00000493916 C3orf84H3BNL1 204 aa16.81■□□□□ 0.28
SNIP1-203ENST00000493916 SYNGR2O43760 224 aa16.81■□□□□ 0.28
SNIP1-203ENST00000493916 ADAP1O75689 374 aa16.81■□□□□ 0.28
SNIP1-203ENST00000493916 PAFAH1B2P68402 229 aa16.81■□□□□ 0.28
SNIP1-203ENST00000493916 EDA2RQ9HAV5 297 aa16.81■□□□□ 0.28
SNIP1-203ENST00000493916 RETNQ9HD89 108 aa16.81■□□□□ 0.28
SNIP1-203ENST00000493916 TRAV2A0A0B4J234 112 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 IGHV3-66A0A0C4DH42 116 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 DFFBO76075 338 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 TOMM40O96008 361 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 IFNA21P01568 189 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 CMC4P56277 68 aaPredicted RBP16.8■□□□□ 0.28
SNIP1-203ENST00000493916 RAB11AP62491 216 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 RPP30P78346 268 aaKnown RBP16.8■□□□□ 0.28
SNIP1-203ENST00000493916 MUC7Q8TAX7 377 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 S100ZQ8WXG8 99 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 NARS2Q96I59 477 aaKnown RBP16.8■□□□□ 0.28
SNIP1-203ENST00000493916 MAGT1Q9H0U3 335 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 U3KQE9 123 aa16.8■□□□□ 0.28
SNIP1-203ENST00000493916 KMT2CQ8NEZ4 4911 aaKnown RBP16.79■□□□□ 0.28
SNIP1-203ENST00000493916 IGKV3-7A0A075B6H7 116 aa16.79■□□□□ 0.28
SNIP1-203ENST00000493916 TFPI2P48307 235 aa16.79■□□□□ 0.28
SNIP1-203ENST00000493916 GAMTQ14353 236 aa16.79■□□□□ 0.28
SNIP1-203ENST00000493916 MITD1Q8WV92 249 aa16.79■□□□□ 0.28
SNIP1-203ENST00000493916 SLC35E1Q96K37 410 aa16.79■□□□□ 0.28
SNIP1-203ENST00000493916 MS4A6AQ9H2W1 248 aa16.79■□□□□ 0.28
SNIP1-203ENST00000493916 MPTX1A8MV57 137 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 HNRNPCP07910 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNIP1-203ENST00000493916 RD3LP0DJH9 198 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 P2RY1P47900 373 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 ID3Q02535 119 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 GBGT1Q8N5D6 347 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 OR4D5Q8NGN0 318 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 GRAMD2BQ96HH9 432 aa16.78■□□□□ 0.28
SNIP1-203ENST00000493916 WRBO00258 174 aa16.77■□□□□ 0.28
SNIP1-203ENST00000493916 TCRBP04435 133 aa16.77■□□□□ 0.28
SNIP1-203ENST00000493916 IL4P05112 153 aa16.77■□□□□ 0.28
SNIP1-203ENST00000493916 APOC4P55056 127 aa16.77■□□□□ 0.28
SNIP1-203ENST00000493916 USF2Q15853 346 aaPredicted RBP16.77■□□□□ 0.28
SNIP1-203ENST00000493916 MAP6D1Q9H9H5 199 aa16.77■□□□□ 0.28
SNIP1-203ENST00000493916 IGKV1D-37A0A075B6S9 117 aa16.76■□□□□ 0.27
SNIP1-203ENST00000493916 PRSS46E5RG02 174 aa16.76■□□□□ 0.27
SNIP1-203ENST00000493916 PSG1P11464 419 aa16.76■□□□□ 0.27
SNIP1-203ENST00000493916 RPL11P62913 178 aaKnown RBP16.76■□□□□ 0.27
SNIP1-203ENST00000493916 PTTG2Q9NZH5 202 aa16.76■□□□□ 0.27
SNIP1-203ENST00000493916 PAIP2BQ9ULR5 123 aaKnown RBP16.76■□□□□ 0.27
SNIP1-203ENST00000493916 KIR2DL5BA0A0G2JN68 375 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 KIR2DL5BA0A0G2JPC4 375 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 ZFP92A6NM28 416 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 DNASE2O00115 360 aaPredicted RBP16.75■□□□□ 0.27
SNIP1-203ENST00000493916 NKX2-1P43699 371 aaPredicted RBP16.75■□□□□ 0.27
SNIP1-203ENST00000493916 APRG1Q8IVJ8 170 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 KIR2DL5AQ8N109 375 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 KIR2DL5BQ8NHK3 375 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 NUDT15Q9NV35 164 aa16.75■□□□□ 0.27
SNIP1-203ENST00000493916 FABP1P07148 127 aa16.74■□□□□ 0.27
SNIP1-203ENST00000493916 POLR2GP62487 172 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNIP1-203ENST00000493916 SPANXN5Q5MJ07 72 aa16.74■□□□□ 0.27
SNIP1-203ENST00000493916 C16orf54Q6UWD8 224 aa16.74■□□□□ 0.27
SNIP1-203ENST00000493916 OR51G1Q8NGK1 321 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms