RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TMEM95Q3KNT9 176 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 STHQ8IWL8 128 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 AGMATQ9BSE5 352 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 ZNF815PA8K554 130 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 COLCA2A8K830 154 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 PRR32B1ATL7 298 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 MORN3Q6PF18 240 aaPredicted RBP16.69■□□□□ 0.26
RNF40-203ENST00000493683 SIGMAR1Q99720 223 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 SEPSECSQ9HD40 501 aaKnown RBP16.69■□□□□ 0.26
RNF40-203ENST00000493683 GAS1P54826 345 aa16.68■□□□□ 0.26
RNF40-203ENST00000493683 NEUROG3Q9Y4Z2 214 aa16.68■□□□□ 0.26
RNF40-203ENST00000493683 ZNF479Q96JC4 524 aa16.68■□□□□ 0.26
RNF40-203ENST00000493683 JMJD8Q96S16 334 aa16.68■□□□□ 0.26
RNF40-203ENST00000493683 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.68■□□□□ 0.26
RNF40-203ENST00000493683 GGTLC1Q9BX51 225 aa16.68■□□□□ 0.26
RNF40-203ENST00000493683 RPUSD1Q9UJJ7 312 aaKnown RBP16.68■□□□□ 0.26
RNF40-203ENST00000493683 TRAV8-4A0A0B4J246 113 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 OOSP1A8MZH6 123 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 VDAC2P45880 294 aaPredicted RBP16.67■□□□□ 0.26
RNF40-203ENST00000493683 MEGF9Q9H1U4 602 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 FNDC4Q9H6D8 234 aaPredicted RBP16.67■□□□□ 0.26
RNF40-203ENST00000493683 COL11A1P12107 1806 aaPredicted RBP16.67■□□□□ 0.26
RNF40-203ENST00000493683 VWCEQ96DN2 955 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 ATXN8Q156A1 80 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 CYTL1Q9NRR1 136 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 TMEM238C9JI98 176 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 CD28P10747 220 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 LAGE3Q14657 143 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 TMEM86BQ8N661 226 aa16.67■□□□□ 0.26
RNF40-203ENST00000493683 PRDM6Q9NQX0 595 aa16.66■□□□□ 0.26
RNF40-203ENST00000493683 SMAD7O15105 426 aaKnown RBP16.66■□□□□ 0.26
RNF40-203ENST00000493683 DTX2Q86UW9 622 aa16.66■□□□□ 0.26
RNF40-203ENST00000493683 DEPPQ9NTK1 212 aa16.66■□□□□ 0.26
RNF40-203ENST00000493683 IGHV1-18A0A0C4DH31 117 aa16.66■□□□□ 0.26
RNF40-203ENST00000493683 ZNF236Q9UL36 1845 aa16.66■□□□□ 0.26
RNF40-203ENST00000493683 SRRM5B3KS81 715 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 THBDP07204 575 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 ZNF319Q9P2F9 582 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 IGHV3-11P01762 117 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 PAX8Q06710 450 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 TRBV6-6A0A0A6YYG2 114 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 AMBPP02760 352 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 TRGV9Q99603 122 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 IGKV1D-8A0A087WSZ0 117 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 GAGE13Q4V321 117 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 C1orf194Q5T5A4 169 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 SAMD5Q5TGI4 173 aa16.65■□□□□ 0.26
RNF40-203ENST00000493683 IGHV4-39P01824 125 aa16.64■□□□□ 0.25
RNF40-203ENST00000493683 SIGLEC15Q6ZMC9 328 aa16.64■□□□□ 0.25
RNF40-203ENST00000493683 TGFAP01135 160 aa16.64■□□□□ 0.25
RNF40-203ENST00000493683 ANAPC13Q9BS18 74 aa16.64■□□□□ 0.25
RNF40-203ENST00000493683 TRAV2A0A0B4J234 112 aa16.64■□□□□ 0.25
RNF40-203ENST00000493683 ZFP36L1Q07352 338 aaKnown RBP16.64■□□□□ 0.25
RNF40-203ENST00000493683 ERG28Q9UKR5 140 aa16.64■□□□□ 0.25
RNF40-203ENST00000493683 IGHV3OR16-8A0A075B7F1 116 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 GGTLC3B5MD39 225 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 IL18BPO95998 194 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 TMEM14EPQ6UXP3 125 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 PLEKHB2Q96CS7 222 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 NMSQ5H8A3 153 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 VSIRQ9H7M9 311 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 SCN10AQ9Y5Y9 1956 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 TIMM23O14925 209 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 WNT2P09544 360 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 SRSF6Q13247 344 aaKnown RBP16.63■□□□□ 0.25
RNF40-203ENST00000493683 LINC01551Q86U37 167 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 MBNL3Q9NUK0 354 aaKnown RBP16.63■□□□□ 0.25
RNF40-203ENST00000493683 IGKV1-12A0A0C4DH73 117 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 E9PLN8 166 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 IGKV1D-12P01611 117 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 GZMBP10144 247 aa16.63■□□□□ 0.25
RNF40-203ENST00000493683 SLC25A39Q9BZJ4 359 aaPredicted RBP16.63■□□□□ 0.25
RNF40-203ENST00000493683 IGHV1-46P01743 117 aa16.62■□□□□ 0.25
RNF40-203ENST00000493683 SRSF4Q08170 494 aaKnown RBP16.62■□□□□ 0.25
RNF40-203ENST00000493683 SPSB3Q6PJ21 355 aa16.62■□□□□ 0.25
RNF40-203ENST00000493683 ACTL10Q5JWF8 245 aa16.62■□□□□ 0.25
RNF40-203ENST00000493683 NABP1Q96AH0 204 aa16.62■□□□□ 0.25
RNF40-203ENST00000493683 MRPL27Q9P0M9 148 aaKnown RBP16.62■□□□□ 0.25
RNF40-203ENST00000493683 CXCL1P09341 107 aa16.62■□□□□ 0.25
RNF40-203ENST00000493683 SUPT4H1P63272 117 aaKnown RBP16.62■□□□□ 0.25
RNF40-203ENST00000493683 M0R2P5 195 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 DTX1Q86Y01 620 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 LYPD1Q8N2G4 141 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 PHLDA1Q8WV24 401 aaPredicted RBP16.61■□□□□ 0.25
RNF40-203ENST00000493683 A0A1B0GWJ7 208 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 DICER1Q9UPY3 1922 aaKnown RBP16.61■□□□□ 0.25
RNF40-203ENST00000493683 CRPP02741 224 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 MINOS1Q5TGZ0 78 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 RPRMLQ8N4K4 120 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 MINOS1-NBL1R4GNA1 71 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 DSCR9P59020 149 aa16.61■□□□□ 0.25
RNF40-203ENST00000493683 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
RNF40-203ENST00000493683 Q6ZS49 121 aa16.6■□□□□ 0.25
RNF40-203ENST00000493683 FNDC10F2Z333 226 aa16.6■□□□□ 0.25
RNF40-203ENST00000493683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.6■□□□□ 0.25
RNF40-203ENST00000493683 ARID2Q68CP9 1835 aa16.6■□□□□ 0.25
RNF40-203ENST00000493683 FOXF2Q12947 444 aa16.6■□□□□ 0.25
RNF40-203ENST00000493683 TCRAP04437 139 aa16.6■□□□□ 0.25
RNF40-203ENST00000493683 TRGV4A0A0C4DH28 118 aa16.59■□□□□ 0.25
RNF40-203ENST00000493683 LTBRP36941 435 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms