RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 TMED4Q7Z7H5 227 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 TOMM5Q8N4H5 51 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 OR4X1Q8NH49 305 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 TRIM63Q969Q1 353 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 GALNT14Q96FL9 552 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 OVOL2Q9BRP0 275 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 RBM38Q9H0Z9 239 aaKnown RBP7.9□□□□□ -1.14
COL6A3-214ENST00000493608 V9GYH0 126 aa7.9□□□□□ -1.14
COL6A3-214ENST00000493608 LYSTQ99698 3801 aa7.9□□□□□ -1.15
COL6A3-214ENST00000493608 AGRNO00468 2067 aa7.9□□□□□ -1.15
COL6A3-214ENST00000493608 RYR3Q15413 4870 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 STARD9Q9P2P6 4700 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 CORTO00230 105 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 DFFBO76075 338 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 SULT1A3P0DMM9 295 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 SULT1A4P0DMN0 295 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 HTR2BP41595 481 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 RPL11P62913 178 aaKnown RBP7.89□□□□□ -1.15
COL6A3-214ENST00000493608 ZNF79Q15937 498 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 AARDQ4LEZ3 155 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 C2orf83Q53S99 150 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 FAM90A2PQ658T7 463 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 CCDC190Q86UF4 302 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 RNF141Q8WVD5 230 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 TMEM170AQ8WVE7 144 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 GINS3Q9BRX5 216 aa7.89□□□□□ -1.15
COL6A3-214ENST00000493608 KRTAP9-7A8MTY7 169 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 DNASE2O00115 360 aaPredicted RBP7.88□□□□□ -1.15
COL6A3-214ENST00000493608 IFNA10P01566 189 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 IGKV1-17P01599 117 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 NPPCP23582 126 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 FAUP35544 74 aaKnown RBP7.88□□□□□ -1.15
COL6A3-214ENST00000493608 RND2P52198 227 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 PAFAH1B2P68402 229 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 SMCO1Q147U7 214 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 DEFB135Q30KP9 77 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 PRSS54Q6PEW0 395 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 LGI3Q8N145 548 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 SLC24A4Q8NFF2 622 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 IL22RA2Q969J5 263 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 MS4A6AQ9H2W1 248 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 RBKSQ9H477 322 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 VSIRQ9H7M9 311 aa7.88□□□□□ -1.15
COL6A3-214ENST00000493608 DYNC2H1Q8NCM8 4307 aaKnown RBP7.87□□□□□ -1.15
COL6A3-214ENST00000493608 A0A0B4J2A0 478 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 RPS10-NUDT3A0A1W2PQS6 291 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 SPRY2O43597 315 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 MED14OSP0DP75 135 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 ANXA3P12429 323 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 NPY1RP25929 384 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 CCR6P51684 374 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 APOC4P55056 127 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 AP3S2P59780 193 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 TNFRSF9Q07011 255 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 RBMS2Q15434 407 aaKnown RBP7.87□□□□□ -1.15
COL6A3-214ENST00000493608 NMSQ5H8A3 153 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 LEMD1Q68G75 181 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 FAM24BQ8N5W8 94 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 STPG3Q8N7X2 389 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 OR1S1Q8NH92 325 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 NPIPB3Q92617 1050 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 ACY3Q96HD9 319 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 METTL26Q96S19 204 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 MAP6D1Q9H9H5 199 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 SHPKQ9UHJ6 478 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 RABAC1Q9UI14 185 aa7.87□□□□□ -1.15
COL6A3-214ENST00000493608 TRAV30A0A087WSZ9 112 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 A0A0J9YWU9 116 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 LINC00854A0A1B0GVQ3 168 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 IGLC1P0CG04 106 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 VAMP1P23763 118 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 CRYBB3P26998 211 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 OR10J1P30954 320 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 DEFB131AP59861 70 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 BAK1Q16611 211 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 TMEM128Q5BJH2 165 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 RNASEH2CQ8TDP1 164 aaKnown RBP7.86□□□□□ -1.15
COL6A3-214ENST00000493608 DTD1Q8TEA8 209 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 HSPB7Q9UBY9 170 aa7.86□□□□□ -1.15
COL6A3-214ENST00000493608 SCGB2A1O75556 95 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 IAPPP10997 89 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 SLC25A4P12235 298 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 BMI1P35226 326 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 P2RY1P47900 373 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 SRPXP78539 464 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 EWSR1Q01844 656 aaKnown RBP eCLIP7.85□□□□□ -1.15
COL6A3-214ENST00000493608 SPANXN2Q5MJ10 180 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 Q6ZWC4 215 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 STXBP6Q8NFX7 210 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 OR1S2Q8NGQ3 325 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 Q8WTZ3 238 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 SRRQ9GZT4 340 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 U3KQ87 197 aa7.85□□□□□ -1.15
COL6A3-214ENST00000493608 KIR2DL5BA0A0G2JN68 375 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 KIR2DL5BA0A0G2JPC4 375 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 LCE6AA0A183 80 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 A0A1W2PS18 150 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 UBE2CO00762 179 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 SFT2D2O95562 160 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 IFNA4P05014 189 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms