RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 DEFB136Q30KP8 78 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 SLC25A24Q6NUK1 477 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 SPSB3Q6PJ21 355 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 C19orf35Q6ZS72 473 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 NRARPQ7Z6K4 114 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 TMEM116Q8NCL8 245 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 OR4D5Q8NGN0 318 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 COQ8AQ8NI60 647 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 RNASEH2CQ8TDP1 164 aaKnown RBP5.12□□□□□ -1.59
VPS52-219ENST00000493379 ZNF431Q8TF32 576 aaPredicted RBP5.12□□□□□ -1.59
VPS52-219ENST00000493379 TMEM170AQ8WVE7 144 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 DPF1Q92782 380 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 EEF1AKMT3Q96AZ1 226 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 DUX3Q96PT4 197 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 PLEKHA3Q9HB20 300 aa5.12□□□□□ -1.59
VPS52-219ENST00000493379 MPTX1A8MV57 137 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 A8MWP6 167 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 PRSS46E5RG02 174 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 PRAF2O60831 178 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 MED6O75586 246 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 ADAP1O75689 374 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 IGLL1P15814 213 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 SNCAP37840 140 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 ELLP55199 621 aaPredicted RBP5.11□□□□□ -1.59
VPS52-219ENST00000493379 TAS2R30P59541 319 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 DEFA1P59665 94 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 DEFA3P59666 94 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 VAMP2P63027 116 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 EXOSC2Q13868 293 aaKnown RBP5.11□□□□□ -1.59
VPS52-219ENST00000493379 DEFB121Q5J5C9 76 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 C9orf66Q5T8R8 295 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 DGAT2L7PQ6IED9 249 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 NOXA1Q86UR1 476 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 OR4X1Q8NH49 305 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 MUC7Q8TAX7 377 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 GATAD1Q8WUU5 269 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 CACNG8Q8WXS5 425 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 BSCL2Q96G97 398 aaPredicted RBP5.11□□□□□ -1.59
VPS52-219ENST00000493379 OR10C1Q96KK4 312 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 OR5B12Q96R08 314 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 PDCD10Q9BUL8 212 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 HIPK2Q9H2X6 1198 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 RBKSQ9H477 322 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 FNDC4Q9H6D8 234 aaPredicted RBP5.11□□□□□ -1.59
VPS52-219ENST00000493379 C21orf62Q9NYP8 219 aa5.11□□□□□ -1.59
VPS52-219ENST00000493379 ZMAT5Q9UDW3 170 aaKnown RBP5.11□□□□□ -1.59
VPS52-219ENST00000493379 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
VPS52-219ENST00000493379 TRAV6A0A075B6T7 132 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 K7EMT4 169 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 TGOLN2O43493 480 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 SPRY2O43597 315 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 SYNGR2O43760 224 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 TMEM50AO95807 157 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 PTTG1O95997 202 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 MT-CO2P00403 227 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 IFNA21P01568 189 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 IGLV1-51P01701 117 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 CSN3P07498 182 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 HOXB5P09067 269 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 SLC25A4P12235 298 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 ARL3P36405 182 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 GPX4P36969 197 aaPredicted RBP5.1□□□□□ -1.59
VPS52-219ENST00000493379 MFAP4P55083 255 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 PAX9P55771 341 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 TATDN3Q17R31 274 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 PLET1Q6UQ28 207 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 CLEC19AQ6UXS0 136 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 C12orf45Q8N5I9 185 aaPredicted RBP5.1□□□□□ -1.59
VPS52-219ENST00000493379 OR52B4Q8NGK2 314 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 OR9G4Q8NGQ1 327 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 DTD1Q8TEA8 209 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 SMIM8Q96KF7 97 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 CIB3Q96Q77 187 aaPredicted RBP5.1□□□□□ -1.59
VPS52-219ENST00000493379 HINT2Q9BX68 163 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 C11orf1Q9H5F2 150 aa5.1□□□□□ -1.59
VPS52-219ENST00000493379 TRAV30A0A087WSZ9 112 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 C7orf66A4D0T2 115 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 C15orf62A8K5M9 175 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 PMS2P5A8MQ11 134 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 CEBPZOSA8MTT3 80 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 INMT-MINDY4F8WBC2 141 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 NDUFA4O00483 81 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 CLN5O75503 358 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 OR2C1O95371 312 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 HOXA5P20719 270 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 NPY1RP25929 384 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 NPBWR1P48145 328 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 SYNJ2BPP57105 145 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 KRTAP10-11P60412 298 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 DEFA5Q01523 94 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 RPEL1Q2QD12 228 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 FAM106AQ4KMX7 169 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 ETFRF1Q6IPR1 90 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 PRSS54Q6PEW0 395 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 ZBTB8BQ8NAP8 495 aaPredicted RBP5.09□□□□□ -1.59
VPS52-219ENST00000493379 SLC24A4Q8NFF2 622 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 OR2K2Q8NGT1 345 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 OR1S1Q8NH92 325 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 RNASE11Q8TAA1 199 aaKnown RBP5.09□□□□□ -1.59
VPS52-219ENST00000493379 ENKURQ8TC29 256 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms