RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 ZNF705DP0CH99 300 aaPredicted RBP15.3■□□□□ 0.04
PFDN4-205ENST00000493356 ZNF705BP0CI00 300 aaPredicted RBP15.3■□□□□ 0.04
PFDN4-205ENST00000493356 PGAM2P15259 253 aa15.3■□□□□ 0.04
PFDN4-205ENST00000493356 EMP1P54849 157 aa15.3■□□□□ 0.04
PFDN4-205ENST00000493356 PIGPP57054 158 aa15.3■□□□□ 0.04
PFDN4-205ENST00000493356 SOHLH1Q5JUK2 328 aa15.3■□□□□ 0.04
PFDN4-205ENST00000493356 Q8WTZ3 238 aa15.3■□□□□ 0.04
PFDN4-205ENST00000493356 ZNF486Q96H40 463 aaPredicted RBP15.3■□□□□ 0.04
PFDN4-205ENST00000493356 SEPSECSQ9HD40 501 aaKnown RBP15.3■□□□□ 0.04
PFDN4-205ENST00000493356 NRN1Q9NPD7 142 aa15.3■□□□□ 0.04
PFDN4-205ENST00000493356 NACAE9PAV3 2078 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 A0A0G2JRQ6 117 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 TMEM189A5PLL7 270 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 M0QYG6 137 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 HLA-DRB4P13762 266 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 USF2Q15853 346 aaPredicted RBP15.29■□□□□ 0.04
PFDN4-205ENST00000493356 SNX29P2Q8IUI4 249 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 OR1S2Q8NGQ3 325 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 HLA-DRB4X5D2U9 266 aa15.29■□□□□ 0.04
PFDN4-205ENST00000493356 C3orf85A0A1B0GTC6 90 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 RPS10-NUDT3A0A1W2PQS6 291 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 RND2P52198 227 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 YPEL3P61236 119 aaPredicted RBP15.28■□□□□ 0.04
PFDN4-205ENST00000493356 DHODHQ02127 395 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 PRSS54Q6PEW0 395 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 Q9H521 79 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 HSPG2P98160 4391 aa15.28■□□□□ 0.04
PFDN4-205ENST00000493356 SMIM9A6NGZ8 99 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 IL4P05112 153 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 OR10J1P30954 320 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 TRIM16LQ309B1 348 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 SP6Q3SY56 376 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 RNF212Q495C1 297 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 LHFPL1Q86WI0 220 aa15.27■□□□□ 0.04
PFDN4-205ENST00000493356 RRNAD1Q96FB5 475 aaKnown RBP15.27■□□□□ 0.04
PFDN4-205ENST00000493356 SMIM31A0A1B0GVY4 71 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 BUB3O43684 328 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 HTR2BP41595 481 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 LSM3P62310 102 aaKnown RBP15.26■□□□□ 0.03
PFDN4-205ENST00000493356 C1orf134Q5TEV5 83 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 GDF5OSQ5U4N7 250 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 SIGLEC15Q6ZMC9 328 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 DKK2Q9UBU2 259 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 RFNGQ9Y644 331 aa15.26■□□□□ 0.03
PFDN4-205ENST00000493356 IGHV3OR16-12A0A075B7B8 117 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 APOA1P02647 267 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 SLC25A4P12235 298 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 NKX2-1P43699 371 aaPredicted RBP15.25■□□□□ 0.03
PFDN4-205ENST00000493356 SPCS3P61009 180 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 AARDQ4LEZ3 155 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 FAM222AQ5U5X8 452 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 NIPSNAP3BQ9BS92 247 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 PLA2G2EQ9NZK7 142 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 COMMD3Q9UBI1 195 aa15.25■□□□□ 0.03
PFDN4-205ENST00000493356 TEX48A0A1B0GUV7 120 aa15.24■□□□□ 0.03
PFDN4-205ENST00000493356 IGKV3-20P01619 116 aa15.24■□□□□ 0.03
PFDN4-205ENST00000493356 UCP1P25874 307 aa15.24■□□□□ 0.03
PFDN4-205ENST00000493356 FXYD7P58549 80 aa15.24■□□□□ 0.03
PFDN4-205ENST00000493356 DEFB1P60022 68 aa15.24■□□□□ 0.03
PFDN4-205ENST00000493356 C2orf83Q53S99 150 aa15.24■□□□□ 0.03
PFDN4-205ENST00000493356 RNASE11Q8TAA1 199 aaKnown RBP15.24■□□□□ 0.03
PFDN4-205ENST00000493356 RNASEH2CQ8TDP1 164 aaKnown RBP15.24■□□□□ 0.03
PFDN4-205ENST00000493356 GSTZ1O43708 216 aaPredicted RBP15.23■□□□□ 0.03
PFDN4-205ENST00000493356 HTN3P15516 51 aa15.23■□□□□ 0.03
PFDN4-205ENST00000493356 RNASE10Q5GAN6 216 aaKnown RBP15.23■□□□□ 0.03
PFDN4-205ENST00000493356 ARRDC1Q8N5I2 433 aa15.23■□□□□ 0.03
PFDN4-205ENST00000493356 OR52E5Q8NH55 327 aa15.23■□□□□ 0.03
PFDN4-205ENST00000493356 HEYLQ9NQ87 328 aaPredicted RBP15.23■□□□□ 0.03
PFDN4-205ENST00000493356 COPZ2Q9P299 210 aa15.23■□□□□ 0.03
PFDN4-205ENST00000493356 NXPH3O95157 252 aa15.22■□□□□ 0.03
PFDN4-205ENST00000493356 YIPF6Q96EC8 236 aa15.22■□□□□ 0.03
PFDN4-205ENST00000493356 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-205ENST00000493356 TOMM40O96008 361 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 RD3LP0DJH9 198 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 ELK1P19419 428 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 OXA1LQ15070 435 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 RNASE12Q5GAN4 147 aaKnown RBP15.21■□□□□ 0.03
PFDN4-205ENST00000493356 ZNF709Q8N972 641 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 CCDC71LQ8N9Z2 235 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 SLC24A4Q8NFF2 622 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 NPIPB3Q92617 1050 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 SAV1Q9H4B6 383 aaPredicted RBP15.21■□□□□ 0.03
PFDN4-205ENST00000493356 KLK11Q9UBX7 282 aa15.21■□□□□ 0.03
PFDN4-205ENST00000493356 CD3DP04234 171 aa15.2■□□□□ 0.02
PFDN4-205ENST00000493356 TMEM88Q6PEY1 159 aa15.2■□□□□ 0.02
PFDN4-205ENST00000493356 FAM219AQ8IW50 185 aa15.2■□□□□ 0.02
PFDN4-205ENST00000493356 ZFAND1Q8TCF1 268 aa15.2■□□□□ 0.02
PFDN4-205ENST00000493356 CLUHP3Q96NS8 147 aa15.2■□□□□ 0.02
PFDN4-205ENST00000493356 WDR12Q9GZL7 423 aaKnown RBP15.2■□□□□ 0.02
PFDN4-205ENST00000493356 HPGDSO60760 199 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 CDK2AP2O75956 126 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 CDS2O95674 445 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 PSG1P11464 419 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 ETFRF1Q6IPR1 90 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 FOXI2Q6ZQN5 318 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 OR51G1Q8NGK1 321 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 OR13C8Q8NGS7 320 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 ACY3Q96HD9 319 aa15.19■□□□□ 0.02
PFDN4-205ENST00000493356 LINC00052Q96N35 136 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms