RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 LINC01619G3V211 115 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 BMPR1BO00238 502 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 TGOLN2O43493 480 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 OR2C1O95371 312 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 PF4P02776 101 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 S100A11P31949 105 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 SLURP1P55000 103 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 RUNX1Q01196 453 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 ZNF616Q08AN1 781 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 TIGITQ495A1 244 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 OR11H4Q8NGC9 324 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
LIME1-208ENST00000493265 ZFP92A6NM28 416 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 NUPL2O15504 423 aaKnown RBP13.22□□□□□ -0.29
LIME1-208ENST00000493265 CLN5O75503 358 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 TSPAN15O95858 294 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 CTSGP08311 255 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 OR10J1P30954 320 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 BAXQ07812 192 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 OR4F17Q8NGA8 305 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 GAR1Q9NY12 217 aaKnown RBP13.22□□□□□ -0.29
LIME1-208ENST00000493265 TNFSF18Q9UNG2 199 aa13.22□□□□□ -0.29
LIME1-208ENST00000493265 WNK1Q9H4A3 2382 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 M0QZ24 198 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 GGCTO75223 188 aaKnown RBP13.21□□□□□ -0.29
LIME1-208ENST00000493265 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
LIME1-208ENST00000493265 HOXD3P31249 432 aaPredicted RBP13.21□□□□□ -0.29
LIME1-208ENST00000493265 ADMP35318 185 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 FAM209BQ5JX69 171 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 TMEM116Q8NCL8 245 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 TMEM147Q9BVK8 224 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.29
LIME1-208ENST00000493265 IGHV3OR16-8A0A075B7F1 116 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 PFDN1O60925 122 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 FCGR2BP31994 310 aaPredicted RBP13.2□□□□□ -0.3
LIME1-208ENST00000493265 MYCNOSP40205 109 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 GGACTQ9BVM4 153 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
LIME1-208ENST00000493265 TRAV30A0A087WSZ9 112 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 ZNF320A2RRD8 509 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 YIF1AO95070 293 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 ZP3P21754 424 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 OR2F1Q13607 317 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 ATP6V1FQ16864 119 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 FBXL17Q9UF56 701 aa13.19□□□□□ -0.3
LIME1-208ENST00000493265 IGKV1D-37A0A075B6S9 117 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 IGKV1OR2-108A0A075B7D4 117 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 C1QBP02746 253 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 EIF2B2P49770 351 aaKnown RBP13.18□□□□□ -0.3
LIME1-208ENST00000493265 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 ZNF90Q03938 601 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 TMEM144Q7Z5S9 345 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
LIME1-208ENST00000493265 ATP6V0BQ99437 205 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 ATP5SQ99766 215 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 WFDC1Q9HC57 220 aa13.18□□□□□ -0.3
LIME1-208ENST00000493265 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 FGF7P21781 194 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 RELQ04864 619 aaPredicted RBP13.17□□□□□ -0.3
LIME1-208ENST00000493265 FHL3Q13643 280 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 FAM106AQ4KMX7 169 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 TEPPQ6URK8 271 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 C20orf24Q9BUV8 137 aa13.17□□□□□ -0.3
LIME1-208ENST00000493265 HMSDA8MTL9 139 aa13.16□□□□□ -0.3
LIME1-208ENST00000493265 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
LIME1-208ENST00000493265 RD3LP0DJH9 198 aa13.16□□□□□ -0.3
LIME1-208ENST00000493265 CXCL2P19875 107 aa13.16□□□□□ -0.3
LIME1-208ENST00000493265 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
LIME1-208ENST00000493265 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
LIME1-208ENST00000493265 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
LIME1-208ENST00000493265 RCC1LQ96I51 464 aaKnown RBP13.16□□□□□ -0.3
LIME1-208ENST00000493265 TRGV9Q99603 122 aa13.16□□□□□ -0.3
LIME1-208ENST00000493265 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
LIME1-208ENST00000493265 DFFBO76075 338 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 IFNA5P01569 189 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 FABP1P07148 127 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 YPEL3P61236 119 aaPredicted RBP13.15□□□□□ -0.3
LIME1-208ENST00000493265 KLF5Q13887 457 aaPredicted RBP13.15□□□□□ -0.3
LIME1-208ENST00000493265 UNQ9165/PRO28630Q6UXU0 137 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 C1QL4Q86Z23 238 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 SCGB1C1Q8TD33 95 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 Q8WTZ3 238 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 MGST2Q99735 147 aa13.15□□□□□ -0.3
LIME1-208ENST00000493265 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms