RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 MRPS16Q9Y3D3 137 aaKnown RBP17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 JKAMPQ9P055 326 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 SEC11AP67812 179 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 AMMECR1LQ6DCA0 310 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 TRIOBPQ9H2D6 2365 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 C9orf172C9J069 976 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 M0QZ24 198 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 ZNF883P0CG24 379 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 DLX1P56177 255 aa17.37■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 F2RL2O00254 374 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 PYGO2Q9BRQ0 406 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 FBXL15Q9H469 300 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 FNDC4Q9H6D8 234 aaPredicted RBP17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 CCL3L1P16619 93 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 OR4X2Q8NGF9 303 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 PROK2Q9HC23 129 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 RALYQ9UKM9 306 aaKnown RBP17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 IGHV1-18A0A0C4DH31 117 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 FNDC10F2Z333 226 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 NPSP0C0P6 89 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 TRBV20OR9-2A0A075B6H5 130 aa17.36■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 TMEM160Q9NX00 188 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 TM4SF20Q53R12 229 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 OR5AN1Q8NGI8 311 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 RPUSD1Q9UJJ7 312 aaKnown RBP17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 CACNA1EQ15878 2313 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 C19orf67A6NJJ6 358 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 GAGE1Q13065 139 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 MPV17L2Q567V2 206 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 ZDBF2Q9HCK1 2354 aa17.35■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 ZNF114Q8NC26 417 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 Q8NFD4 153 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 DOCK11Q5JSL3 2073 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 TRAV8-6A0A0B4J262 113 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 MUC21A0A0G2JKD1 596 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 MUC21A0A140T8X8 626 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 MUC21Q5SSG8 566 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 TTC9CQ8N5M4 171 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 NEUROG1Q92886 237 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 COX11Q9Y6N1 276 aa17.34■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 Q6ZSR3 168 aa17.33■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 CGB1A6NKQ9 187 aa17.33■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 HBDP02042 147 aa17.33■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 RAB9AP51151 201 aa17.33■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.33■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 DENND4AQ7Z401 1863 aa17.33■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR11H12B2RN74 326 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 ATP5LO75964 103 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 MYOD1P15172 320 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 FER1L6-AS1Q8NA97 138 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR11H1Q8NG94 326 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR11H2Q8NH07 326 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 METTL26Q96S19 204 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 hDV102S1A0JD36 115 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 MLNRO43193 412 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 FAM27E3Q08E93 113 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 C16orf92Q96LL3 132 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SYS1-DBNDD2H3BUS1 97 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 M0R3E3 92 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 IGLC2P0DOY2 106 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 IGLC3P0DOY3 106 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SELLP14151 372 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 EP400Q96L91 3159 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 TEX43Q6ZNM6 134 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR1N2Q8NGR9 330 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SHANK1Q9Y566 2161 aa17.32■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 CENPVQ7Z7K6 275 aaPredicted RBP17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 PSG8Q9UQ74 426 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 LMO1P25800 156 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 WFDC3Q8IUB2 231 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 FOXC2Q99958 501 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 CEP250Q9BV73 2442 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 CDX4O14627 284 aaPredicted RBP17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SLC25A48Q6ZT89 311 aaKnown RBP17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR2K2Q8NGT1 345 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 C8orf46Q8TAG6 207 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 DOPEY2Q9Y3R5 2298 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SCRT1Q9BWW7 348 aa17.31■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SH2D7A6NKC9 451 aaPredicted RBP17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 UNQ6494/PRO21346Q6UXR6 183 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR5A1Q8NGJ0 315 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 SPTBN2O15020 2390 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 IGKV3-7A0A075B6H7 116 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 FTH1P19P0C7X4 201 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 RPL15P61313 204 aaKnown RBP17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 CACNG7P62955 275 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 C18orf32Q8TCD1 76 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 MEGF9Q9H1U4 602 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 V9GYV3 84 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 HSD52Q0P140 79 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 OR10J6PQ8NGY7 276 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 KLK15Q9H2R5 256 aa17.3■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 FAM106CPP0CH98 169 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 A0A1B0GV72 72 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 C17orf100A8MU93 164 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 PRR31Q5SQ13 230 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 C10orf55Q5SWW7 151 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 KIR2DL5BA0A0G2JN68 375 aa17.29■□□□□ 0.36
CHKB-CPT1B-203ENST00000492556 KIR2DL5BA0A0G2JPC4 375 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms