RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	TRAV14DV4	A0A0A6YYC5	116 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	ZNF785	A8K8V0	405 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	OR10J1	P30954	320 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	GUCA2B	Q16661	112 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	LAMTOR1	Q6IAA8	161 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451		Q8N1Y9	231 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	ACY3	Q96HD9	319 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	GSKIP	Q9P0R6	139 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	SMPX	Q9UHP9	88 aa		10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	PAIP2B	Q9ULR5	123 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	STRAP	Q9Y3F4	350 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PTPN7-215	ENST00000492451	IGHV3OR16-8	A0A075B7F1	116 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	IGHV7-4-1	A0A0J9YVY3	117 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	ZNF207	O43670	478 aa	Known RBP	10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	IGKV1-17	P01599	117 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	IGLC1	P0CG04	106 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	YPEL3	P61236	119 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	POLR2G	P62487	172 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	TIGIT	Q495A1	244 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	SPANXN5	Q5MJ07	72 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	TMEM61	Q8N0U2	210 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451		Q8WTZ3	238 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	NPIPB3	Q92617	1050 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	WDR89	Q96FK6	387 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	ZNF414	Q96IQ9	312 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	SLC35E1	Q96K37	410 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	RAB40C	Q96S21	281 aa		10.41	□□□□□ -0.74
PTPN7-215	ENST00000492451	C5orf51	A6NDU8	294 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	SSSCA1	O60232	199 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	SCGB1D2	O95969	90 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	CD5	P06127	495 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	FABP1	P07148	127 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	TAS2R30	P59541	319 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	SMIM8	Q96KF7	97 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	RHPN1-AS1	Q9BWJ2	59 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	ZFAND3	Q9H8U3	227 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	PSENEN	Q9NZ42	101 aa		10.4	□□□□□ -0.74
PTPN7-215	ENST00000492451	FAM25E	A8MYX2	175 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451		A8MZ25	164 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	CCS	O14618	274 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	CHEK1	O14757	476 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	TSPAN4	O14817	238 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	SSNA1	O43805	119 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	SCAF4	O95104	1147 aa	Known RBP	10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	NHLRC4	P0CG21	123 aa	Predicted RBP	10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	NPPC	P23582	126 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	CD81	P60033	236 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	CYCS	P99999	105 aa	Known RBP	10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	GAMT	Q14353	236 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	GSG1L	Q6UXU4	331 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	NARS2	Q96I59	477 aa	Known RBP	10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	C2orf50	Q96LR7	162 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	METTL26	Q96S19	204 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	SPAG8	Q99932	426 aa	Predicted RBP	10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	NEURL2	Q9BR09	285 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451	TMEM231	Q9H6L2	316 aa		10.39	□□□□□ -0.75
PTPN7-215	ENST00000492451		A0A1W2PS18	150 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	ZFP92	A6NM28	416 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451		H3BP45	60 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	TSC22D2	O75157	780 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	MBP	P02686	304 aa	Predicted RBP	10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	RD3L	P0DJH9	198 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	IGHV4-30-4	P0DP06	118 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	SELENOK	Q9Y6D0	94 aa		10.38	□□□□□ -0.75
PTPN7-215	ENST00000492451	IGHV3-49	A0A0A0MS15	119 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451		L7N2F9	121 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	TOMM40	O96008	361 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	FRMD6-AS1	P0C7T7	363 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	VAMP2	P63027	116 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	OXA1L	Q15070	435 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	RNF2	Q99496	336 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	VSIR	Q9H7M9	311 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	TUBA4B	Q9H853	241 aa		10.37	□□□□□ -0.75
PTPN7-215	ENST00000492451	C7orf66	A4D0T2	115 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	OR4C46	A6NHA9	309 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	PRSS46	E5RG02	174 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	CD7	P09564	240 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	CRYBB3	P26998	211 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	PAX9	P55771	341 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	PAFAH1B2	P68402	229 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	GRAMD2B	Q96HH9	432 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	C19orf73	Q9NVV2	129 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	PFDN2	Q9UHV9	154 aa		10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	RCL1	Q9Y2P8	373 aa	Known RBP	10.36	□□□□□ -0.75
PTPN7-215	ENST00000492451	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	OR11H12	B2RN74	326 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	CFD	P00746	253 aa	Predicted RBP	10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	IL4	P05112	153 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	PSG1	P11464	419 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	PVALB	P20472	110 aa	Predicted RBP	10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	CMC4	P56277	68 aa	Predicted RBP	10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	OR8G2P	Q6IF36	304 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	TMEM14EP	Q6UXP3	125 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	THAP8	Q8NA92	274 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	OR10P1	Q8NGE3	313 aa		10.35	□□□□□ -0.75
PTPN7-215	ENST00000492451	OR51G1	Q8NGK1	321 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 62 ms