RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FAM106AQ4KMX7 169 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 CNIH2Q6PI25 160 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 ZNF773Q6PK81 442 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 ADAMTSL5Q6ZMM2 481 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 TMEM167AQ8TBQ9 72 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 DYNLRB2Q8TF09 96 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 OR2A7Q96R45 310 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-212ENST00000492407 NDUFB11Q9NX14 153 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 HSPB7Q9UBY9 170 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 FLVCR2Q9UPI3 526 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 C2orf70A6NJV1 201 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 TEX22C9J3V5 150 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 FCGR3BO75015 233 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 ADAP1O75689 374 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 KBTBD11O94819 623 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 GABARAPO95166 117 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 HRASP01112 189 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 HOXB5P09067 269 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 TBPP20226 339 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 HOXA5P20719 270 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 FGF7P21781 194 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 CBLN1P23435 193 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 POU2AF1Q16633 256 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 OR4A47Q6IF82 309 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 ZNF66Q6ZN08 573 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 ACOT7LQ6ZUV0 252 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 OR4A5Q8NH83 315 aa6.88□□□□□ -1.31
HDAC3-212ENST00000492407 FYTTD1Q96QD9 318 aaKnown RBP6.88□□□□□ -1.31
HDAC3-212ENST00000492407 IGKV1D-8A0A087WSZ0 117 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 TRBV7-1A0A0A6YYK4 115 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 RBMY1BA6NDE4 496 aaKnown RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 RBMY1EA6NEQ0 496 aaKnown RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 IGLV2-14P01704 120 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 IL6RP08887 468 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 RBMY1DP0C7P1 496 aaKnown RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 APELAP0DMC3 54 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 FGF9P31371 208 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 RPL27AP46776 148 aaKnown RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 OR52B4Q8NGK2 314 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 EEF1AKMT3Q96AZ1 226 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 CXorf58Q96LI9 332 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 SRSF8Q9BRL6 282 aaKnown RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 ST6GALNAC5Q9BVH7 336 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 ATG5Q9H1Y0 275 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 SRD5A3Q9H8P0 318 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 PLEKHA3Q9HB20 300 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 GAR1Q9NY12 217 aaKnown RBP6.87□□□□□ -1.31
HDAC3-212ENST00000492407 ANXA10Q9UJ72 324 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
HDAC3-212ENST00000492407 TGIF2-C20orf24A0A0A6YYL0 155 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 RBFOX2O43251 390 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC3-212ENST00000492407 OR2J3O76001 311 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 OR2C1O95371 312 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 APOC3P02656 99 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 PRH1P02810 166 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 CD7P09564 240 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 C8orf88P0DMB2 117 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 OR10A3P58181 314 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 RRAS2P62070 204 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-212ENST00000492407 RPL8P62917 257 aaKnown RBP6.86□□□□□ -1.31
HDAC3-212ENST00000492407 EIF5AP63241 154 aaKnown RBP6.86□□□□□ -1.31
HDAC3-212ENST00000492407 DEFA5Q01523 94 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 UBE2V1Q13404 147 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 SCGB2B2Q4G0G5 96 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 ZNF57Q68EA5 555 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-212ENST00000492407 CCDC190Q86UF4 302 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 LGI3Q8N145 548 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 DEFB125Q8N687 156 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 ZNF431Q8TF32 576 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-212ENST00000492407 FANCD2OSQ96PS1 177 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 RSG1Q9BU20 258 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 BET1LQ9NYM9 111 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 THYN1Q9P016 225 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
HDAC3-212ENST00000492407 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 PPP5D1E7EU14 171 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 SNAI2O43623 268 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 NDUFB8O95169 186 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 NFYAP23511 347 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-212ENST00000492407 BRWD1-AS2P59051 145 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 GABARAPL2P60520 117 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 RPL30P62888 115 aaKnown RBP6.85□□□□□ -1.31
HDAC3-212ENST00000492407 GCSAMLQ5JQS6 135 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 FAM74A1Q5RGS3 127 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 C10orf55Q5SWW7 151 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 WFDC3Q8IUB2 231 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 UBAC2Q8NBM4 344 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms