RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PRR27Q6MZM9 219 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 ZNF841Q6ZN19 808 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 Q71RC1 249 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-220ENST00000492280 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 GZMBP10144 247 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM30BQ3MIR4 351 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 MRPL54Q6P161 138 aaKnown RBP9.98□□□□□ -0.81
HMGN1-220ENST00000492280 MMD2Q8IY49 270 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 C11orf52Q96A22 123 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 ASCL2Q99929 193 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 INSIG2Q9Y5U4 225 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 V9GYV3 84 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 CACNA1AO00555 2505 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 TGOLN2O43493 480 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 TYMSP04818 313 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 HIST1H1BP16401 226 aaKnown RBP9.97□□□□□ -0.81
HMGN1-220ENST00000492280 CASP6P55212 293 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
HMGN1-220ENST00000492280 ADORA2A-AS1P86434 159 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 C10orf113Q5VZT2 155 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 LINC00305Q7Z4B0 112 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
HMGN1-220ENST00000492280 FAM168AQ92567 244 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM167BQ9NRX6 74 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 KAAG1Q9UBP8 84 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 DMRT1Q9Y5R6 373 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 A0A1W2PN81 502 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 NDUFS7O75251 213 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 PLGLAQ15195 96 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 ST6GALNAC3Q8NDV1 305 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 OR1L6Q8NGR2 347 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 VSTM2AQ8TAG5 236 aa9.97□□□□□ -0.81
HMGN1-220ENST00000492280 SNURFLB1AK76 121 aa9.96□□□□□ -0.81
HMGN1-220ENST00000492280 IGLV1-47P01700 117 aa9.96□□□□□ -0.81
HMGN1-220ENST00000492280 IGLV2-8P01709 118 aa9.96□□□□□ -0.81
HMGN1-220ENST00000492280 RPL27AP46776 148 aaKnown RBP9.96□□□□□ -0.81
HMGN1-220ENST00000492280 LINC00311Q8N616 119 aa9.96□□□□□ -0.81
HMGN1-220ENST00000492280 PAXXQ9BUH6 204 aa9.96□□□□□ -0.81
HMGN1-220ENST00000492280 MYO18BQ8IUG5 2567 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 TCRBV4S1A1TA0A5B7 111 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 CD99P14209 185 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 CA7P43166 264 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 TAS2R45P59539 299 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 RAB4BP61018 213 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 LCN2P80188 198 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 LY6DQ14210 128 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 KLF17Q5JT82 389 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-220ENST00000492280 RPEQ96AT9 228 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 TNFRSF19Q9NS68 423 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 IL36BQ9NZH7 164 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 TP53TG3Q9ULZ0 132 aa9.96□□□□□ -0.82
HMGN1-220ENST00000492280 BUB1B-PAK6H3BSN5 160 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 FOXL1Q12952 345 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 TXNDC17Q9BRA2 123 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 MRPL18Q9H0U6 180 aaKnown RBP9.95□□□□□ -0.82
HMGN1-220ENST00000492280 SIGLEC9Q9Y336 463 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 FNDC10F2Z333 226 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 ISLRO14498 428 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 LINC00310P59036 64 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 CLEC7AQ9BXN2 247 aa9.95□□□□□ -0.82
HMGN1-220ENST00000492280 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 TIMM23O14925 209 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
HMGN1-220ENST00000492280 ZNF137PP52743 207 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 RPEL1Q2QD12 228 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 TIGITQ495A1 244 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 ZNF596Q8TC21 504 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 A0A087X0M5 115 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 A0A1B0GX30 115 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 C9JCJ5 164 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 CORTO00230 105 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 CDKN1AP38936 164 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 MMDQ15546 238 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 IBA57Q5T440 356 aaKnown RBP9.94□□□□□ -0.82
HMGN1-220ENST00000492280 CACNG8Q8WXS5 425 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 IGF2BP2-AS1Q96M15 143 aa9.94□□□□□ -0.82
HMGN1-220ENST00000492280 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-220ENST00000492280 PPP1R27Q86WC6 154 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 GBGT1Q8N5D6 347 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 FXYD5Q96DB9 178 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 POLQO75417 2590 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 FSTL3O95633 263 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 GPX4P36969 197 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-220ENST00000492280 LYZP61626 148 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 JOSD1Q15040 202 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-220ENST00000492280 SRSF12Q8WXF0 261 aaKnown RBP9.93□□□□□ -0.82
HMGN1-220ENST00000492280 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-220ENST00000492280 ACACBO00763 2458 aa9.93□□□□□ -0.82
HMGN1-220ENST00000492280 TEX22C9J3V5 150 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 SERF1AO75920 110 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 MC5RP33032 325 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 COMPP49747 757 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-220ENST00000492280 PDLIM4P50479 330 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.825e-59■■■■■ 41.6
HMGN1-220ENST00000492280 COA6Q5JTJ3 125 aaKnown RBP9.92□□□□□ -0.82
HMGN1-220ENST00000492280 ZNF329Q86UD4 541 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 ZNF664Q8N3J9 261 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
HMGN1-220ENST00000492280 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms