RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 LAMTOR1Q6IAA8 161 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 UNQ9165/PRO28630Q6UXU0 137 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 FAM219AQ8IW50 185 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 SCARB1Q8WTV0 552 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 MED28Q9H204 178 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 TMEM56-RWDD3S4R434 201 aa6.54□□□□□ -1.36
GABRE-211ENST00000491339 HUWE1Q7Z6Z7 4374 aaKnown RBP6.53□□□□□ -1.36
GABRE-211ENST00000491339 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 K7EIM0 57 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 GNG7O60262 68 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 SCAF4O95104 1147 aaKnown RBP6.53□□□□□ -1.36
GABRE-211ENST00000491339 CD7P09564 240 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 MFAP2P55001 183 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 SSTP61278 116 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 HAGHQ16775 308 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 TMEM268Q5VZI3 342 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 LRTM2Q8N967 370 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 ZNF431Q8TF32 576 aaPredicted RBP6.53□□□□□ -1.36
GABRE-211ENST00000491339 MITD1Q8WV92 249 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 PINX1Q96BK5 328 aaKnown RBP6.53□□□□□ -1.36
GABRE-211ENST00000491339 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 TXN2Q99757 166 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 SPAG8Q99932 426 aaPredicted RBP6.53□□□□□ -1.36
GABRE-211ENST00000491339 MBD2Q9UBB5 411 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 A0A0B4J2A0 478 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 DUXBA0A1W2PPF3 345 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 MT-CO2P00403 227 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 IGKV1-5P01602 117 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 NDUFA5Q16718 116 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 DEFB125Q8N687 156 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 SEC22CQ9BRL7 303 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 SHPKQ9UHJ6 478 aa6.53□□□□□ -1.36
GABRE-211ENST00000491339 DNAH7Q8WXX0 4024 aa6.52□□□□□ -1.36
GABRE-211ENST00000491339 C15orf62A8K5M9 175 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 C8orf88P0DMB2 117 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 LYL1P12980 280 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 FCGR2BP31994 310 aaPredicted RBP6.52□□□□□ -1.37
GABRE-211ENST00000491339 NPBWR1P48145 328 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 POLR2GP62487 172 aaKnown RBP eCLIP6.52□□□□□ -1.37
GABRE-211ENST00000491339 SPINK9Q5DT21 86 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 SELENOHQ8IZQ5 122 aaKnown RBP6.52□□□□□ -1.37
GABRE-211ENST00000491339 LHFPL5Q8TAF8 219 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 PRR13Q9NZ81 148 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 TMED3Q9Y3Q3 217 aa6.52□□□□□ -1.37
GABRE-211ENST00000491339 OR4C46A6NHA9 309 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 I3L2K1 104 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 K7EMT4 169 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 YIF1AO95070 293 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 ATF4P18848 351 aaPredicted RBP6.51□□□□□ -1.37
GABRE-211ENST00000491339 FCN2Q15485 313 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 SLC51BQ86UW2 128 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 C12orf45Q8N5I9 185 aaPredicted RBP6.51□□□□□ -1.37
GABRE-211ENST00000491339 CHRDL1Q9BU40 450 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 GGTLC1Q9BX51 225 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 SELENOKQ9Y6D0 94 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 RPS10-NUDT3A0A1W2PQS6 291 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
GABRE-211ENST00000491339 TSPAN4O14817 238 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 IFNA21P01568 189 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 P0C879 139 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 OPRK1P41145 380 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 IFITM2Q01629 132 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 IZUMO4Q1ZYL8 232 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 LYZL2Q7Z4W2 148 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 OR11H7Q8NGC8 314 aa6.51□□□□□ -1.37
GABRE-211ENST00000491339 LOC102724200A0A096LPH7 203 aaPredicted RBP6.5□□□□□ -1.37
GABRE-211ENST00000491339 SSNA1O43805 119 aa6.5□□□□□ -1.37
GABRE-211ENST00000491339 HOXB5P09067 269 aa6.5□□□□□ -1.37
GABRE-211ENST00000491339 ADMP35318 185 aa6.5□□□□□ -1.37
GABRE-211ENST00000491339 SPCS3P61009 180 aa6.5□□□□□ -1.37
GABRE-211ENST00000491339 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.5□□□□□ -1.37
GABRE-211ENST00000491339 IGHV3OR16-8A0A075B7F1 116 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 IGHV7-4-1A0A0J9YVY3 117 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 ZNF207O43670 478 aaKnown RBP6.49□□□□□ -1.37
GABRE-211ENST00000491339 CD5P06127 495 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 CTSGP08311 255 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 GIPP09681 153 aaPredicted RBP6.49□□□□□ -1.37
GABRE-211ENST00000491339 HTR2BP41595 481 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 APOC4P55056 127 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 RAP2BP61225 183 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 ZNF124Q15973 351 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 NMSQ5H8A3 153 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 CASC10Q5T4H9 136 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 LINC00322Q6ZN03 302 aaPredicted RBP6.49□□□□□ -1.37
GABRE-211ENST00000491339 TMEM116Q8NCL8 245 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 OR52E5Q8NH55 327 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 IL17DQ8TAD2 202 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 NARS2Q96I59 477 aaKnown RBP6.49□□□□□ -1.37
GABRE-211ENST00000491339 HIPK2Q9H2X6 1198 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 TMEM231Q9H6L2 316 aa6.49□□□□□ -1.37
GABRE-211ENST00000491339 RETNQ9HD89 108 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms