RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 PLA2G2EQ9NZK7 142 aa14.74□□□□□ -0.05
CLIP2-208ENST00000491075 RPS10-NUDT3A0A1W2PQS6 291 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 SMIM9A6NGZ8 99 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 BSXQ3C1V8 233 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 C1orf134Q5TEV5 83 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 OR1S2Q8NGQ3 325 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 Q8WTZ3 238 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 ZNF486Q96H40 463 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-208ENST00000491075 SCPEP1Q9HB40 452 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 NRN1Q9NPD7 142 aa14.73□□□□□ -0.05
CLIP2-208ENST00000491075 IGLC1P0CG04 106 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 HLA-DRB4P13762 266 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 RCVRNP35243 200 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 EMP1P54849 157 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 TP53RKQ96S44 253 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 RFNGQ9Y644 331 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 HLA-DRB4X5D2U9 266 aa14.72□□□□□ -0.05
CLIP2-208ENST00000491075 PGAM2P15259 253 aa14.71□□□□□ -0.05
CLIP2-208ENST00000491075 YPEL3P61236 119 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-208ENST00000491075 NIPSNAP3BQ9BS92 247 aa14.71□□□□□ -0.05
CLIP2-208ENST00000491075 GSTZ1O43708 216 aaPredicted RBP14.7□□□□□ -0.06
CLIP2-208ENST00000491075 OR10J1P30954 320 aa14.7□□□□□ -0.06
CLIP2-208ENST00000491075 NKX2-1P43699 371 aaPredicted RBP14.7□□□□□ -0.06
CLIP2-208ENST00000491075 PIGPP57054 158 aa14.7□□□□□ -0.06
CLIP2-208ENST00000491075 NEDD8Q15843 81 aa14.7□□□□□ -0.06
CLIP2-208ENST00000491075 SIGLEC15Q6ZMC9 328 aa14.7□□□□□ -0.06
CLIP2-208ENST00000491075 Q9H521 79 aa14.7□□□□□ -0.06
CLIP2-208ENST00000491075 DKK2Q9UBU2 259 aa14.7□□□□□ -0.06
CLIP2-208ENST00000491075 SLC25A4P12235 298 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 PI3P19957 117 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 TGFBR1P36897 503 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 RPS19P39019 145 aaKnown RBP14.69□□□□□ -0.06
CLIP2-208ENST00000491075 HTR2BP41595 481 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 RND2P52198 227 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 DHODHQ02127 395 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 USF2Q15853 346 aaPredicted RBP14.69□□□□□ -0.06
CLIP2-208ENST00000491075 PRSS54Q6PEW0 395 aa14.69□□□□□ -0.06
CLIP2-208ENST00000491075 RRNAD1Q96FB5 475 aaKnown RBP14.69□□□□□ -0.06
CLIP2-208ENST00000491075 IGHV3OR16-12A0A075B7B8 117 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 C3orf85A0A1B0GTC6 90 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 BUB3O43684 328 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 IL4P05112 153 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 OXA1LQ15070 435 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 TRIM16LQ309B1 348 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 FAM222AQ5U5X8 452 aa14.68□□□□□ -0.06
CLIP2-208ENST00000491075 RNASE11Q8TAA1 199 aaKnown RBP14.68□□□□□ -0.06
CLIP2-208ENST00000491075 SMIM31A0A1B0GVY4 71 aa14.67□□□□□ -0.06
CLIP2-208ENST00000491075 M0QYG6 137 aa14.67□□□□□ -0.06
CLIP2-208ENST00000491075 HTN3P15516 51 aa14.67□□□□□ -0.06
CLIP2-208ENST00000491075 SPCS3P61009 180 aa14.67□□□□□ -0.06
CLIP2-208ENST00000491075 SNX29P2Q8IUI4 249 aa14.67□□□□□ -0.06
CLIP2-208ENST00000491075 RNASEH2CQ8TDP1 164 aaKnown RBP14.67□□□□□ -0.06
CLIP2-208ENST00000491075 A0A0G2JRQ6 117 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 C16orf90A8MZG2 172 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 APOA1P02647 267 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 FAM3BP58499 235 aaPredicted RBP14.66□□□□□ -0.06
CLIP2-208ENST00000491075 AARDQ4LEZ3 155 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 C2orf83Q53S99 150 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 LHFPL1Q86WI0 220 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 CLUHP3Q96NS8 147 aa14.66□□□□□ -0.06
CLIP2-208ENST00000491075 TOMM40O96008 361 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 IGKV3-20P01619 116 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 UCP1P25874 307 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 NUP62P37198 522 aaPredicted RBP14.65□□□□□ -0.06
CLIP2-208ENST00000491075 FXYD7P58549 80 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 RNASE10Q5GAN6 216 aaKnown RBP14.65□□□□□ -0.06
CLIP2-208ENST00000491075 GDF5OSQ5U4N7 250 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 FAM219AQ8IW50 185 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 OR52E5Q8NH55 327 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 SAV1Q9H4B6 383 aaPredicted RBP14.65□□□□□ -0.06
CLIP2-208ENST00000491075 HEYLQ9NQ87 328 aaPredicted RBP14.65□□□□□ -0.06
CLIP2-208ENST00000491075 COPZ2Q9P299 210 aa14.65□□□□□ -0.06
CLIP2-208ENST00000491075 B3GALNT1O75752 331 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 RD3LP0DJH9 198 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 SP6Q3SY56 376 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 ETFRF1Q6IPR1 90 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 TMEM88Q6PEY1 159 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 FOXI2Q6ZQN5 318 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 ARRDC1Q8N5I2 433 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 MAPKAPK5-AS1Q8N8E1 139 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 ZNF709Q8N972 641 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 CCDC71LQ8N9Z2 235 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 SLC24A4Q8NFF2 622 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 GOLT1BQ9Y3E0 138 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 TMED3Q9Y3Q3 217 aa14.64□□□□□ -0.07
CLIP2-208ENST00000491075 HBE1P02100 147 aa14.63□□□□□ -0.07
CLIP2-208ENST00000491075 C15orf53Q8NAA6 179 aa14.63□□□□□ -0.07
CLIP2-208ENST00000491075 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.63□□□□□ -0.07
CLIP2-208ENST00000491075 COMMD3Q9UBI1 195 aa14.63□□□□□ -0.07
CLIP2-208ENST00000491075 LRP1BQ9NZR2 4599 aa14.62□□□□□ -0.07
CLIP2-208ENST00000491075 TNP2Q05952 138 aa14.62□□□□□ -0.07
CLIP2-208ENST00000491075 SPATA31B1PQ5VZV4 182 aa14.62□□□□□ -0.07
CLIP2-208ENST00000491075 ZFAND1Q8TCF1 268 aa14.62□□□□□ -0.07
CLIP2-208ENST00000491075 NPIPB3Q92617 1050 aa14.62□□□□□ -0.07
CLIP2-208ENST00000491075 PFDN2Q9UHV9 154 aa14.62□□□□□ -0.07
CLIP2-208ENST00000491075 YTHDF2Q9Y5A9 579 aaKnown RBP14.62□□□□□ -0.07
CLIP2-208ENST00000491075 LOC102723971A0A1B0GUV8 181 aa14.61□□□□□ -0.07
CLIP2-208ENST00000491075 TBPP20226 339 aa14.61□□□□□ -0.07
CLIP2-208ENST00000491075 ID1P41134 155 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms