RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TNFRSF9Q07011 255 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 SMCO1Q147U7 214 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 PRSS54Q6PEW0 395 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 CCDC190Q86UF4 302 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 WFDC3Q8IUB2 231 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 STPG3Q8N7X2 389 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 TP53TG1Q9Y2A0 90 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 RYR2Q92736 4967 aa23.19■■□□□ 1.3
LDB1-204ENST00000490751 SPRY2O43597 315 aa23.18■■□□□ 1.3
LDB1-204ENST00000490751 METTL26Q96S19 204 aa23.18■■□□□ 1.3
LDB1-204ENST00000490751 HSPB7Q9UBY9 170 aa23.18■■□□□ 1.3
LDB1-204ENST00000490751 IGLC1P0CG04 106 aa23.17■■□□□ 1.3
LDB1-204ENST00000490751 RPL11P62913 178 aaKnown RBP23.17■■□□□ 1.3
LDB1-204ENST00000490751 OR1S2Q8NGQ3 325 aa23.17■■□□□ 1.3
LDB1-204ENST00000490751 MS4A6AQ9H2W1 248 aa23.17■■□□□ 1.3
LDB1-204ENST00000490751 A0A1W2PS18 150 aa23.16■■□□□ 1.3
LDB1-204ENST00000490751 DNASE2O00115 360 aaPredicted RBP23.16■■□□□ 1.3
LDB1-204ENST00000490751 NOXA1Q86UR1 476 aa23.16■■□□□ 1.3
LDB1-204ENST00000490751 LYSTQ99698 3801 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 ZNF701M0R085 212 aaPredicted RBP23.15■■□□□ 1.3
LDB1-204ENST00000490751 IFNA10P01566 189 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 CRYBB3P26998 211 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 TMEM128Q5BJH2 165 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 ETFRF1Q6IPR1 90 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 DTD1Q8TEA8 209 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 RBKSQ9H477 322 aa23.15■■□□□ 1.3
LDB1-204ENST00000490751 OR10J1P30954 320 aa23.14■■□□□ 1.29
LDB1-204ENST00000490751 OR1S1Q8NH92 325 aa23.14■■□□□ 1.29
LDB1-204ENST00000490751 DEDD2Q8WXF8 326 aa23.14■■□□□ 1.29
LDB1-204ENST00000490751 TRAV2A0A0B4J234 112 aa23.13■■□□□ 1.29
LDB1-204ENST00000490751 RNF183Q96D59 192 aa23.13■■□□□ 1.29
LDB1-204ENST00000490751 NARS2Q96I59 477 aaKnown RBP23.13■■□□□ 1.29
LDB1-204ENST00000490751 SLC25A21Q9BQT8 299 aaPredicted RBP23.13■■□□□ 1.29
LDB1-204ENST00000490751 U3KQ87 197 aa23.13■■□□□ 1.29
LDB1-204ENST00000490751 PIGBOS1A0A0B4J2F0 54 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 VAMP1P23763 118 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 P2RY1P47900 373 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 YPEL3P61236 119 aaPredicted RBP23.12■■□□□ 1.29
LDB1-204ENST00000490751 SPANXN2Q5MJ10 180 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 Q8WTZ3 238 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 NPIPB3Q92617 1050 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 ACY3Q96HD9 319 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 RABAC1Q9UI14 185 aa23.12■■□□□ 1.29
LDB1-204ENST00000490751 A0A0J9YWU9 116 aa23.11■■□□□ 1.29
LDB1-204ENST00000490751 DUXBA0A1W2PPF3 345 aa23.11■■□□□ 1.29
LDB1-204ENST00000490751 RBMS2Q15434 407 aaKnown RBP23.11■■□□□ 1.29
LDB1-204ENST00000490751 FAM24BQ8N5W8 94 aa23.11■■□□□ 1.29
LDB1-204ENST00000490751 SRRQ9GZT4 340 aa23.11■■□□□ 1.29
LDB1-204ENST00000490751 DEFB131AP59861 70 aa23.1■■□□□ 1.29
LDB1-204ENST00000490751 LYG2Q86SG7 212 aa23.1■■□□□ 1.29
LDB1-204ENST00000490751 STXBP6Q8NFX7 210 aa23.1■■□□□ 1.29
LDB1-204ENST00000490751 CSTL1Q9H114 145 aa23.1■■□□□ 1.29
LDB1-204ENST00000490751 GRAMD2BQ96HH9 432 aa23.09■■□□□ 1.29
LDB1-204ENST00000490751 MPTX1A8MV57 137 aa23.08■■□□□ 1.29
LDB1-204ENST00000490751 LEMD1Q68G75 181 aa23.08■■□□□ 1.29
LDB1-204ENST00000490751 LRTM2Q8N967 370 aa23.08■■□□□ 1.29
LDB1-204ENST00000490751 U3KQE9 123 aa23.08■■□□□ 1.29
LDB1-204ENST00000490751 PITX3O75364 302 aa23.07■■□□□ 1.28
LDB1-204ENST00000490751 IFNA4P05014 189 aa23.07■■□□□ 1.28
LDB1-204ENST00000490751 HNRNPCP07910 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
LDB1-204ENST00000490751 PPP1R1AQ13522 171 aa23.07■■□□□ 1.28
LDB1-204ENST00000490751 CENPSQ8N2Z9 138 aa23.07■■□□□ 1.28
LDB1-204ENST00000490751 K7EQG2 157 aa23.06■■□□□ 1.28
LDB1-204ENST00000490751 SFT2D2O95562 160 aa23.06■■□□□ 1.28
LDB1-204ENST00000490751 IL4P05112 153 aa23.06■■□□□ 1.28
LDB1-204ENST00000490751 EWSR1Q01844 656 aaKnown RBP eCLIP23.06■■□□□ 1.286e-6■■■■□ 22.1
LDB1-204ENST00000490751 USF2Q15853 346 aaPredicted RBP23.06■■□□□ 1.28
LDB1-204ENST00000490751 DNAH1Q9P2D7 4330 aa23.06■■□□□ 1.28
LDB1-204ENST00000490751 TOMM40O96008 361 aa23.05■■□□□ 1.28
LDB1-204ENST00000490751 ATP5IP56385 69 aaPredicted RBP23.05■■□□□ 1.28
LDB1-204ENST00000490751 RD3LP0DJH9 198 aa23.04■■□□□ 1.28
LDB1-204ENST00000490751 SLC25A6P12236 298 aa23.04■■□□□ 1.28
LDB1-204ENST00000490751 INPP1P49441 399 aa23.04■■□□□ 1.28
LDB1-204ENST00000490751 C16orf54Q6UWD8 224 aa23.04■■□□□ 1.28
LDB1-204ENST00000490751 JTBO76095 146 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 IAPPP10997 89 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 EIF2B2P49770 351 aaKnown RBP23.03■■□□□ 1.28
LDB1-204ENST00000490751 BAK1Q16611 211 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 TRIQKQ629K1 86 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 DCANP1Q8TF63 244 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 GLMPQ8WWB7 406 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 TMED3Q9Y3Q3 217 aa23.03■■□□□ 1.28
LDB1-204ENST00000490751 HELTA6NFD8 242 aa23.02■■□□□ 1.28
LDB1-204ENST00000490751 PSG1P11464 419 aa23.02■■□□□ 1.28
LDB1-204ENST00000490751 PMS2P11Q13670 270 aa23.02■■□□□ 1.28
LDB1-204ENST00000490751 GATAD1Q8WUU5 269 aa23.02■■□□□ 1.28
LDB1-204ENST00000490751 FAM90A26D6RGX4 464 aa23.01■■□□□ 1.27
LDB1-204ENST00000490751 HOXB5P09067 269 aa23.01■■□□□ 1.27
LDB1-204ENST00000490751 ZNF688P0C7X2 276 aa23.01■■□□□ 1.27
LDB1-204ENST00000490751 GPX4P36969 197 aaPredicted RBP23.01■■□□□ 1.27
LDB1-204ENST00000490751 SLC35E1Q96K37 410 aa23.01■■□□□ 1.27
LDB1-204ENST00000490751 CXorf65A6NEN9 183 aa23■■□□□ 1.27
LDB1-204ENST00000490751 CA1P00915 261 aaPredicted RBP23■■□□□ 1.27
LDB1-204ENST00000490751 GAMTQ14353 236 aa23■■□□□ 1.27
LDB1-204ENST00000490751 STHQ8IWL8 128 aa23■■□□□ 1.27
LDB1-204ENST00000490751 NAP1L6A6NFF2 107 aa22.99■■□□□ 1.27
LDB1-204ENST00000490751 MED6O75586 246 aa22.99■■□□□ 1.27
LDB1-204ENST00000490751 UBE2MP61081 183 aaKnown RBP22.99■■□□□ 1.27
LDB1-204ENST00000490751 DHRS2Q13268 280 aa22.99■■□□□ 1.27
LDB1-204ENST00000490751 OR51G1Q8NGK1 321 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms