RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TMEM177Q53S58 311 aa12.64□□□□□ -0.39
BRD9-208ENST00000489816 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
BRD9-208ENST00000489816 C11orf42Q8N5U0 333 aa12.64□□□□□ -0.39
BRD9-208ENST00000489816 PAXXQ9BUH6 204 aa12.64□□□□□ -0.39
BRD9-208ENST00000489816 PPOXP50336 477 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 PDLIM4P50479 330 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 BTF3L4Q96K17 158 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 HSPB9Q9BQS6 159 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 TXNDC17Q9BRA2 123 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 SAMD10Q9BYL1 202 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 AMMECR1Q9Y4X0 333 aaPredicted RBP12.63□□□□□ -0.39
BRD9-208ENST00000489816 ISLRO14498 428 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 LINC00310P59036 64 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 ST6GALNAC6Q969X2 333 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 CBLN4Q9NTU7 201 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 ZFHX3Q15911 3703 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 VSTM5A8MXK1 200 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 C22orf46C9J442 243 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 CDKN1AP38936 164 aa12.63□□□□□ -0.39
BRD9-208ENST00000489816 PLGLAQ15195 96 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
BRD9-208ENST00000489816 C11orf52Q96A22 123 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 TMEM186Q96B77 213 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 TBX15Q96SF7 602 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 TNFRSF19Q9NS68 423 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 HILPDAQ9Y5L2 63 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 CORTO00230 105 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 IGLV2-8P01709 118 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 VMA21Q3ZAQ7 101 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 TMEM155Q4W5P6 130 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 OR5R1Q8NH85 324 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
BRD9-208ENST00000489816 CAMPP49913 170 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 RNF114Q9Y508 228 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 A8MWP6 167 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 PMCHP20382 165 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 SSTP61278 116 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 Q6ZWC4 215 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 Q71RC1 249 aaPredicted RBP12.61□□□□□ -0.39
BRD9-208ENST00000489816 PDPNQ86YL7 162 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 LINC00469Q8N7U9 141 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 VN1R17PQ8TDU5 208 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 TMEM133Q9H2Q1 129 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 ONECUT1Q9UBC0 465 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 C9JCJ5 164 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 GPR6P46095 362 aaPredicted RBP12.61□□□□□ -0.39
BRD9-208ENST00000489816 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
BRD9-208ENST00000489816 GNB4Q9HAV0 340 aa12.61□□□□□ -0.39
BRD9-208ENST00000489816 ZMAT5Q9UDW3 170 aaKnown RBP12.61□□□□□ -0.39
BRD9-208ENST00000489816 IGHV2-26A0A0B4J1V2 119 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 CD3EP07766 207 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 ARF6P62330 175 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
BRD9-208ENST00000489816 REC114Q7Z4M0 266 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 VSTM2AQ8TAG5 236 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 PAM16Q9Y3D7 125 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 A0A1W2PN81 502 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 PGPA6NDG6 321 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 GCGP01275 180 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 DLX6P56179 175 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 YPEL3P61236 119 aaPredicted RBP12.6□□□□□ -0.39
BRD9-208ENST00000489816 MUC15Q8N387 334 aa12.6□□□□□ -0.39
BRD9-208ENST00000489816 TCRBV4S1A1TA0A5B7 111 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 SLC25A5P05141 298 aaKnown RBP12.59□□□□□ -0.39
BRD9-208ENST00000489816 KRTDAPP60985 99 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 MRGPRG-AS1Q2M3A8 158 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 PNKDQ8N490 385 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 CACNG8Q8WXS5 425 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 TRAV8-1A0A0A6YYK1 113 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 IGLC7A0M8Q6 106 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 SIAH2O43255 324 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 NTF3P20783 257 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 SRIP30626 198 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 APOBEC3AP31941 199 aaPredicted RBP12.59□□□□□ -0.39
BRD9-208ENST00000489816 RPL27AP46776 148 aaKnown RBP12.59□□□□□ -0.39
BRD9-208ENST00000489816 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRD9-208ENST00000489816 POLR3KQ9Y2Y1 108 aaPredicted RBP12.59□□□□□ -0.39
BRD9-208ENST00000489816 TNFRSF13BO14836 293 aaPredicted RBP12.59□□□□□ -0.39
BRD9-208ENST00000489816 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
BRD9-208ENST00000489816 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
BRD9-208ENST00000489816 ZNF253O75346 499 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 LDLRAD2Q5SZI1 272 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 PPIAL4CA0A0B4J2A2 164 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 EREGO14944 169 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 RBP4P02753 201 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 PPIAL4GP0DN37 164 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 LYZP61626 148 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 KLRD1Q13241 179 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 RPEQ96AT9 228 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 JKAMPQ9P055 326 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms