RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 TSPAN4O14817 238 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 IGLC1P0CG04 106 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 OR10J1P30954 320 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
MDC1-206ENST00000489540 OR4D5Q8NGN0 318 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 ZNF431Q8TF32 576 aaPredicted RBP13.04□□□□□ -0.32
MDC1-206ENST00000489540 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 TUBA4BQ9H853 241 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
MDC1-206ENST00000489540 WRBO00258 174 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 CHEK1O14757 476 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
MDC1-206ENST00000489540 IAH1Q2TAA2 248 aaPredicted RBP13.03□□□□□ -0.32
MDC1-206ENST00000489540 TIGITQ495A1 244 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 Q8WTZ3 238 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 ASCL2Q99929 193 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
MDC1-206ENST00000489540 ZFAND3Q9H8U3 227 aa13.03□□□□□ -0.32
MDC1-206ENST00000489540 CD5P06127 495 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 CD7P09564 240 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 NPPCP23582 126 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 IFITM3Q01628 133 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 SBSPONQ8IVN8 264 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 ENKURQ8TC29 256 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
MDC1-206ENST00000489540 DNAH9Q9NYC9 4486 aa13.02□□□□□ -0.33
MDC1-206ENST00000489540 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
MDC1-206ENST00000489540 C12orf45Q8N5I9 185 aaPredicted RBP13.01□□□□□ -0.33
MDC1-206ENST00000489540 SLC35E1Q96K37 410 aa13.01□□□□□ -0.33
MDC1-206ENST00000489540 METTL26Q96S19 204 aa13.01□□□□□ -0.33
MDC1-206ENST00000489540 RNF2Q99496 336 aa13.01□□□□□ -0.33
MDC1-206ENST00000489540 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
MDC1-206ENST00000489540 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
MDC1-206ENST00000489540 IGHV3-49A0A0A0MS15 119 aa13□□□□□ -0.33
MDC1-206ENST00000489540 A0A1W2PS18 150 aa13□□□□□ -0.33
MDC1-206ENST00000489540 OR11H12B2RN74 326 aa13□□□□□ -0.33
MDC1-206ENST00000489540 IL5P05113 134 aa13□□□□□ -0.33
MDC1-206ENST00000489540 RD3LP0DJH9 198 aa13□□□□□ -0.33
MDC1-206ENST00000489540 DEFA1P59665 94 aa13□□□□□ -0.33
MDC1-206ENST00000489540 DEFA3P59666 94 aa13□□□□□ -0.33
MDC1-206ENST00000489540 GAMTQ14353 236 aa13□□□□□ -0.33
MDC1-206ENST00000489540 SPANXN5Q5MJ07 72 aa13□□□□□ -0.33
MDC1-206ENST00000489540 ZBTB8BQ8NAP8 495 aaPredicted RBP13□□□□□ -0.33
MDC1-206ENST00000489540 VSIRQ9H7M9 311 aa13□□□□□ -0.33
MDC1-206ENST00000489540 GSKIPQ9P0R6 139 aa13□□□□□ -0.33
MDC1-206ENST00000489540 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
MDC1-206ENST00000489540 OR4C46A6NHA9 309 aa12.99□□□□□ -0.33
MDC1-206ENST00000489540 NARS2Q96I59 477 aaKnown RBP12.99□□□□□ -0.33
MDC1-206ENST00000489540 SMIM8Q96KF7 97 aa12.99□□□□□ -0.33
MDC1-206ENST00000489540 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
MDC1-206ENST00000489540 TOMM40O96008 361 aa12.98□□□□□ -0.33
MDC1-206ENST00000489540 CRYBB3P26998 211 aa12.98□□□□□ -0.33
MDC1-206ENST00000489540 DEFB125Q8N687 156 aa12.98□□□□□ -0.33
MDC1-206ENST00000489540 RAB40CQ96S21 281 aa12.98□□□□□ -0.33
MDC1-206ENST00000489540 GPN1Q9HCN4 374 aaPredicted RBP12.98□□□□□ -0.33
MDC1-206ENST00000489540 IGHV3OR16-13A0A075B7E8 117 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 IGHV3-74A0A0B4J1X5 117 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 SSSCA1O60232 199 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 SCGB1D2O95969 90 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
MDC1-206ENST00000489540 FABP1P07148 127 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 TAS2R30P59541 319 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 PAFAH1B2P68402 229 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 FAM90A2PQ658T7 463 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 NRARPQ7Z6K4 114 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 U3KQK5 164 aa12.97□□□□□ -0.33
MDC1-206ENST00000489540 C5orf51A6NDU8 294 aa12.96□□□□□ -0.33
MDC1-206ENST00000489540 H3BP45 60 aa12.96□□□□□ -0.33
MDC1-206ENST00000489540 CMC4P56277 68 aaPredicted RBP12.96□□□□□ -0.33
MDC1-206ENST00000489540 LINC00322Q6ZN03 302 aaPredicted RBP12.96□□□□□ -0.33
MDC1-206ENST00000489540 TCF24Q7RTU0 167 aa12.96□□□□□ -0.33
MDC1-206ENST00000489540 GRAMD2BQ96HH9 432 aa12.96□□□□□ -0.33
MDC1-206ENST00000489540 SRD5A3Q9H8P0 318 aa12.96□□□□□ -0.33
MDC1-206ENST00000489540 PRSS46E5RG02 174 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 CCSO14618 274 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 PRAF2O60831 178 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 DFFBO76075 338 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 MBPP02686 304 aaPredicted RBP12.96□□□□□ -0.34
MDC1-206ENST00000489540 IL4P05112 153 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 PSG1P11464 419 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 PAX9P55771 341 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 LILRB2Q8N423 598 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 OR51G1Q8NGK1 321 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 C2orf50Q96LR7 162 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 TRGV9Q99603 122 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 FAM110AQ9BQ89 295 aa12.96□□□□□ -0.34
MDC1-206ENST00000489540 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 SNRPGP15A8MWD9 76 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 TSC22D2O75157 780 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 HNRNPCP07910 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
MDC1-206ENST00000489540 HAGHQ16775 308 aa12.95□□□□□ -0.34
MDC1-206ENST00000489540 GSG1LQ6UXU4 331 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms