RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 PHYHIPLQ96FC7 376 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 WFDC1Q9HC57 220 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 MRPL36Q9P0J6 103 aaKnown RBP11.04□□□□□ -0.64
CLDN11-209ENST00000489485 WNK1Q9H4A3 2382 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
CLDN11-209ENST00000489485 SCAF4O95104 1147 aaKnown RBP11.03□□□□□ -0.64
CLDN11-209ENST00000489485 GPX4P36969 197 aaPredicted RBP11.03□□□□□ -0.64
CLDN11-209ENST00000489485 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
CLDN11-209ENST00000489485 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
CLDN11-209ENST00000489485 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
CLDN11-209ENST00000489485 ACY3Q96HD9 319 aa11.03□□□□□ -0.64
CLDN11-209ENST00000489485 SHISA2Q6UWI4 295 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 VN1R17PQ8TDU5 208 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 ATP5SQ99766 215 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 UQCC1Q9NVA1 299 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.64
CLDN11-209ENST00000489485 TRBV7-1A0A0A6YYK4 115 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 UBE2L5PA0A1B0GUS4 154 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 BCL2L11O43521 198 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 RND2P52198 227 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 DLK1P80370 383 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 AKR1C1Q04828 323 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 ATP6V1FQ16864 119 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 ACSM6Q6P461 480 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 ST8SIA2Q92186 375 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 NPIPB3Q92617 1050 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 SLC35E1Q96K37 410 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 GGACTQ9BVM4 153 aa11.02□□□□□ -0.65
CLDN11-209ENST00000489485 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 TAAR5O14804 337 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 DFFBO76075 338 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
CLDN11-209ENST00000489485 KRTAP21-3Q3LHN1 58 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 Q56UQ5 140 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
CLDN11-209ENST00000489485 ZNF343Q6P1L6 599 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 CLEC19AQ6UXS0 136 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 SVIPQ8NHG7 77 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 TMEM147Q9BVK8 224 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
CLDN11-209ENST00000489485 SCO1O75880 301 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 CLEC3BP05452 202 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 GPR183P32249 361 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 VWC2Q2TAL6 325 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 TMEM116Q8NCL8 245 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 ZNF502Q8TBZ5 544 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 LINC00052Q96N35 136 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
CLDN11-209ENST00000489485 CYTL1Q9NRR1 136 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
CLDN11-209ENST00000489485 IGKV1OR2-108A0A075B7D4 117 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 OR2T8A6NH00 312 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 TRBV12-3P01733 135 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 MFAP4P55083 255 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 ZNF266Q14584 549 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 OR11H1Q8NG94 326 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 DUX3Q96PT4 197 aa11□□□□□ -0.65
CLDN11-209ENST00000489485 PPP5D1E7EU14 171 aa10.99□□□□□ -0.65
CLDN11-209ENST00000489485 GNG7O60262 68 aa10.99□□□□□ -0.65
CLDN11-209ENST00000489485 IFNA5P01569 189 aa10.99□□□□□ -0.65
CLDN11-209ENST00000489485 TEPPQ6URK8 271 aa10.99□□□□□ -0.65
CLDN11-209ENST00000489485 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
CLDN11-209ENST00000489485 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
CLDN11-209ENST00000489485 OR4X1Q8NH49 305 aa10.99□□□□□ -0.65
CLDN11-209ENST00000489485 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.98□□□□□ -0.65
CLDN11-209ENST00000489485 FNDC10F2Z333 226 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
CLDN11-209ENST00000489485 JTBO76095 146 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 FGF7P21781 194 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 ARL3P36405 182 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 NPBWR1P48145 328 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 RUNX1Q01196 453 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 HSD17B11Q8NBQ5 300 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 DPF1Q92782 380 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 WDR61Q9GZS3 305 aaKnown RBP10.98□□□□□ -0.65
CLDN11-209ENST00000489485 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 A0A087WW49 117 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 BORCS7-ASMTA0A0B4J1R7 106 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 ZFP92A6NM28 416 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 CLN5O75503 358 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 HSPB1P04792 205 aaKnown RBP10.98□□□□□ -0.65
CLDN11-209ENST00000489485 FAM209BQ5JX69 171 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 BTNL8Q6UX41 500 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 SCGB1C1Q8TD33 95 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 RAX2Q96IS3 184 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 TXN2Q99757 166 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 GAR1Q9NY12 217 aaKnown RBP10.98□□□□□ -0.65
CLDN11-209ENST00000489485 WDR83OSQ9Y284 106 aa10.98□□□□□ -0.65
CLDN11-209ENST00000489485 LSM4Q9Y4Z0 139 aaKnown RBP10.98□□□□□ -0.65
CLDN11-209ENST00000489485 CCL24O00175 119 aa10.97□□□□□ -0.65
CLDN11-209ENST00000489485 OR10J1P30954 320 aa10.97□□□□□ -0.65
CLDN11-209ENST00000489485 CTAG1AP78358 180 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms