RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 ATP5IP56385 69 aaPredicted RBP11.83□□□□□ -0.52
LMX1A-204ENST00000489443 ASAH1Q13510 395 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 LAMTOR1Q6IAA8 161 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 SBSPONQ8IVN8 264 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 MITD1Q8WV92 249 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 NPIPB3Q92617 1050 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 GINS3Q9BRX5 216 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 RHPN1-AS1Q9BWJ2 59 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 CHEK1O14757 476 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 OR10J1P30954 320 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 SLC16A13Q7RTY0 426 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 OR1S2Q8NGQ3 325 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 CIB3Q96Q77 187 aaPredicted RBP11.82□□□□□ -0.52
LMX1A-204ENST00000489443 SEC22CQ9BRL7 303 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 ZFAND3Q9H8U3 227 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
LMX1A-204ENST00000489443 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 RAB11AP62491 216 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 ID3Q02535 119 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 IAH1Q2TAA2 248 aaPredicted RBP11.81□□□□□ -0.52
LMX1A-204ENST00000489443 DEFB125Q8N687 156 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 RNF2Q99496 336 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 WFDC10AQ9H1F0 79 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 GSKIPQ9P0R6 139 aa11.81□□□□□ -0.52
LMX1A-204ENST00000489443 IGHV3-66A0A0C4DH42 116 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 A8MZ25 164 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 TSPAN4O14817 238 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
LMX1A-204ENST00000489443 GPX4P36969 197 aaPredicted RBP11.8□□□□□ -0.52
LMX1A-204ENST00000489443 NKX2-1P43699 371 aaPredicted RBP11.8□□□□□ -0.52
LMX1A-204ENST00000489443 POLR2GP62487 172 aaKnown RBP eCLIP11.8□□□□□ -0.52
LMX1A-204ENST00000489443 RPP30P78346 268 aaKnown RBP11.8□□□□□ -0.52
LMX1A-204ENST00000489443 IFITM3Q01628 133 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 SPANXN5Q5MJ07 72 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 ENKURQ8TC29 256 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 ZNF431Q8TF32 576 aaPredicted RBP11.8□□□□□ -0.52
LMX1A-204ENST00000489443 Q8WTZ3 238 aa11.8□□□□□ -0.52
LMX1A-204ENST00000489443 H3BP45 60 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 CCSO14618 274 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 NPPCP23582 126 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
LMX1A-204ENST00000489443 GAMTQ14353 236 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 C12orf45Q8N5I9 185 aaPredicted RBP11.79□□□□□ -0.52
LMX1A-204ENST00000489443 OR4D5Q8NGN0 318 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 ST8SIA2Q92186 375 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 SLC35E1Q96K37 410 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 SPAG8Q99932 426 aaPredicted RBP11.79□□□□□ -0.52
LMX1A-204ENST00000489443 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
LMX1A-204ENST00000489443 U3KQK5 164 aa11.79□□□□□ -0.52
LMX1A-204ENST00000489443 IGKV3-7A0A075B6H7 116 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 FAM25EA8MYX2 175 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 SSSCA1O60232 199 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 BMI1P35226 326 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 LILRB2Q8N423 598 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 ZBTB8BQ8NAP8 495 aaPredicted RBP11.78□□□□□ -0.52
LMX1A-204ENST00000489443 METTL26Q96S19 204 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 SRD5A3Q9H8P0 318 aa11.78□□□□□ -0.52
LMX1A-204ENST00000489443 OR4C46A6NHA9 309 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 ZFP92A6NM28 416 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 RD3LP0DJH9 198 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 TFPI2P48307 235 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 RPL11P62913 178 aaKnown RBP11.77□□□□□ -0.53
LMX1A-204ENST00000489443 HAGHQ16775 308 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 TCF24Q7RTU0 167 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 VSIRQ9H7M9 311 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 UBQLN2Q9UHD9 624 aa11.77□□□□□ -0.53
LMX1A-204ENST00000489443 A0A1W2PS18 150 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 DFFBO76075 338 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 IL4P05112 153 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 CRYBB3P26998 211 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 NRARPQ7Z6K4 114 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 NARS2Q96I59 477 aaKnown RBP11.76□□□□□ -0.53
LMX1A-204ENST00000489443 SMIM8Q96KF7 97 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 TMEM231Q9H6L2 316 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 ZMAT4Q9H898 229 aa11.76□□□□□ -0.53
LMX1A-204ENST00000489443 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
LMX1A-204ENST00000489443 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
LMX1A-204ENST00000489443 TOMM40O96008 361 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 MBPP02686 304 aaPredicted RBP11.75□□□□□ -0.53
LMX1A-204ENST00000489443 IL5P05113 134 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 CD5P06127 495 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
LMX1A-204ENST00000489443 PSG1P11464 419 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 DEFA1P59665 94 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 DEFA3P59666 94 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 FAM90A2PQ658T7 463 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
LMX1A-204ENST00000489443 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
LMX1A-204ENST00000489443 PAX9P55771 341 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
LMX1A-204ENST00000489443 ZNF90Q03938 601 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms