RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RND2P52198 227 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 PMS2P11Q13670 270 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 NMSQ5H8A3 153 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 FAM24BQ8N5W8 94 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 TRIM63Q969Q1 353 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 CSTL1Q9H114 145 aa16.93■□□□□ 0.3
COL9A3-213ENST00000489045 TRAV2A0A0B4J234 112 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 MPTX1A8MV57 137 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 P2RY1P47900 373 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 DEFB131AP59861 70 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 KLF9Q13886 244 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-213ENST00000489045 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 OR1S2Q8NGQ3 325 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 CACFD1Q9UGQ2 172 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 RABAC1Q9UI14 185 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 ALMS1Q8TCU4 4167 aa16.92■□□□□ 0.3
COL9A3-213ENST00000489045 A0A0B4J2A0 478 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 CXorf65A6NEN9 183 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 CCDC160A6NGH7 325 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 OR10J1P30954 320 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 FAUP35544 74 aaKnown RBP16.91■□□□□ 0.3
COL9A3-213ENST00000489045 CCR6P51684 374 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 SMCO1Q147U7 214 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 PYDC2Q56P42 97 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 LEMD1Q68G75 181 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 NARS2Q96I59 477 aaKnown RBP16.91■□□□□ 0.3
COL9A3-213ENST00000489045 HSPB7Q9UBY9 170 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 SHPKQ9UHJ6 478 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 V9GYH0 126 aa16.91■□□□□ 0.3
COL9A3-213ENST00000489045 ANXA3P12429 323 aa16.9■□□□□ 0.3
COL9A3-213ENST00000489045 RBMS2Q15434 407 aaKnown RBP16.9■□□□□ 0.3
COL9A3-213ENST00000489045 ETFRF1Q6IPR1 90 aa16.9■□□□□ 0.3
COL9A3-213ENST00000489045 LGI3Q8N145 548 aa16.9■□□□□ 0.3
COL9A3-213ENST00000489045 TOMM5Q8N4H5 51 aa16.9■□□□□ 0.3
COL9A3-213ENST00000489045 STXBP6Q8NFX7 210 aa16.9■□□□□ 0.3
COL9A3-213ENST00000489045 IFNA10P01566 189 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 AP3S2P59780 193 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 YPEL3P61236 119 aaPredicted RBP16.89■□□□□ 0.29
COL9A3-213ENST00000489045 SRPXP78539 464 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 TMED4Q7Z7H5 227 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 NOXA1Q86UR1 476 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 DTD1Q8TEA8 209 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 Q8WTZ3 238 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 RBKSQ9H477 322 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 HYDINQ4G0P3 5121 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 AGRNO00468 2067 aa16.89■□□□□ 0.29
COL9A3-213ENST00000489045 K7EQG2 157 aa16.88■□□□□ 0.29
COL9A3-213ENST00000489045 ATF4P18848 351 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-213ENST00000489045 ZNF79Q15937 498 aa16.88■□□□□ 0.29
COL9A3-213ENST00000489045 GATAD1Q8WUU5 269 aa16.88■□□□□ 0.29
COL9A3-213ENST00000489045 NPIPB3Q92617 1050 aa16.88■□□□□ 0.29
COL9A3-213ENST00000489045 ACY3Q96HD9 319 aa16.88■□□□□ 0.29
COL9A3-213ENST00000489045 GRAMD2BQ96HH9 432 aa16.88■□□□□ 0.29
COL9A3-213ENST00000489045 NUPR2A6NF83 97 aa16.87■□□□□ 0.29
COL9A3-213ENST00000489045 CA1P00915 261 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-213ENST00000489045 HNRNPCP07910 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL9A3-213ENST00000489045 TMEM217Q8N7C4 229 aa16.87■□□□□ 0.29
COL9A3-213ENST00000489045 OR1S1Q8NH92 325 aa16.87■□□□□ 0.29
COL9A3-213ENST00000489045 RARRES2Q99969 163 aa16.87■□□□□ 0.29
COL9A3-213ENST00000489045 U3KQ87 197 aa16.87■□□□□ 0.29
COL9A3-213ENST00000489045 U3KQE9 123 aa16.87■□□□□ 0.29
COL9A3-213ENST00000489045 IL4P05112 153 aa16.86■□□□□ 0.29
COL9A3-213ENST00000489045 S100A5P33763 92 aa16.86■□□□□ 0.29
COL9A3-213ENST00000489045 USF2Q15853 346 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-213ENST00000489045 TMEM128Q5BJH2 165 aa16.85■□□□□ 0.29
COL9A3-213ENST00000489045 STHQ8IWL8 128 aa16.85■□□□□ 0.29
COL9A3-213ENST00000489045 DCANP1Q8TF63 244 aa16.85■□□□□ 0.29
COL9A3-213ENST00000489045 RBM38Q9H0Z9 239 aaKnown RBP16.85■□□□□ 0.29
COL9A3-213ENST00000489045 DUXBA0A1W2PPF3 345 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 TOMM40O96008 361 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 ZNF688P0C7X2 276 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 VAMP1P23763 118 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 CEMP1Q6PRD7 247 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-213ENST00000489045 C16orf54Q6UWD8 224 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 CCDC190Q86UF4 302 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 OR11H2Q8NH07 326 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 GLMPQ8WWB7 406 aa16.84■□□□□ 0.29
COL9A3-213ENST00000489045 PIGBOS1A0A0B4J2F0 54 aa16.83■□□□□ 0.28
COL9A3-213ENST00000489045 HELTA6NFD8 242 aa16.83■□□□□ 0.28
COL9A3-213ENST00000489045 IFNA4P05014 189 aa16.83■□□□□ 0.28
COL9A3-213ENST00000489045 RD3LP0DJH9 198 aa16.83■□□□□ 0.28
COL9A3-213ENST00000489045 EIF2B2P49770 351 aaKnown RBP16.83■□□□□ 0.28
COL9A3-213ENST00000489045 SLC25A21Q9BQT8 299 aaPredicted RBP16.83■□□□□ 0.28
COL9A3-213ENST00000489045 DHRS2Q13268 280 aa16.82■□□□□ 0.28
COL9A3-213ENST00000489045 DEDD2Q8WXF8 326 aa16.82■□□□□ 0.28
COL9A3-213ENST00000489045 LINC00476Q8WZB0 136 aa16.82■□□□□ 0.28
COL9A3-213ENST00000489045 EPPK1P58107 5090 aaKnown RBP16.81■□□□□ 0.28
COL9A3-213ENST00000489045 KNCNA6PVL3 124 aa16.81■□□□□ 0.28
COL9A3-213ENST00000489045 PITX3O75364 302 aa16.81■□□□□ 0.28
COL9A3-213ENST00000489045 PSG1P11464 419 aa16.81■□□□□ 0.28
COL9A3-213ENST00000489045 TRPT1Q86TN4 253 aaKnown RBP16.81■□□□□ 0.28
COL9A3-213ENST00000489045 LRTM2Q8N967 370 aa16.81■□□□□ 0.28
COL9A3-213ENST00000489045 C11orf68Q9H3H3 251 aaKnown RBP16.81■□□□□ 0.28
COL9A3-213ENST00000489045 AP2S1P53680 142 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-213ENST00000489045 ATP5IP56385 69 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-213ENST00000489045 PPP1R1AQ13522 171 aa16.8■□□□□ 0.28
COL9A3-213ENST00000489045 OR51G1Q8NGK1 321 aa16.8■□□□□ 0.28
COL9A3-213ENST00000489045 SFT2D2O95562 160 aa16.79■□□□□ 0.28
COL9A3-213ENST00000489045 IAPPP10997 89 aa16.79■□□□□ 0.28
COL9A3-213ENST00000489045 GAMTQ14353 236 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 279 ms