RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 FBXO7Q9Y3I1 522 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 A6NDX4 124 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 IGHV4-59P01825 116 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 AMY1AP04745 511 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 G0S2P27469 103 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 MFAP2P55001 183 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 DLK1P80370 383 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 EIF5AL1Q6IS14 154 aaKnown RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 RSG1Q9BU20 258 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 FLNBO75369 2602 aaKnown RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 SMCO3A2RU48 225 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 EREGO14944 169 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 PPP1R2P9O14990 202 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 CD5LO43866 347 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 SEC11BP0C7V7 166 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 FGF7P21781 194 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 SUB1P53999 127 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 ASPHD1Q5U4P2 390 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 Q6ZRG5 221 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 SCGB1C1Q8TD33 95 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 TAF15Q92804 592 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 ZNF48Q96MX3 618 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 PARD6GQ9BYG4 376 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 JOSD1Q15040 202 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 MLANAQ16655 118 aa8.63□□□□□ -1.03
COL21A1-211ENST00000488912 GNPNAT1Q96EK6 184 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
COL21A1-211ENST00000488912 M0R036 132 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 EGR2P11161 476 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 MDKP21741 143 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 IER3P46695 156 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 PVRIGQ6DKI7 326 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 TREML4Q6UXN2 200 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 TMEM182Q6ZP80 229 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 OR2G3Q8NGZ4 309 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 OR1P1Q8NH06 330 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 RNASEH2CQ8TDP1 164 aaKnown RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 C20orf24Q9BUV8 137 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 PITPNC1Q9UKF7 332 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 ATP6V0E1O15342 81 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 OPRK1P41145 380 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 RPS10P46783 165 aaKnown RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 CD69Q07108 199 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 LFNGQ8NES3 379 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 ATG101Q9BSB4 218 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-211ENST00000488912 WDR83OSQ9Y284 106 aa8.62□□□□□ -1.03
COL21A1-211ENST00000488912 OR2C1O95371 312 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 Q6YL49 198 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 MRPL52Q86TS9 123 aaKnown RBP8.61□□□□□ -1.03
COL21A1-211ENST00000488912 ZNF664Q8N3J9 261 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 TMEM208Q9BTX3 173 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 SNHG12Q9BXW3 62 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 WNT10AQ9GZT5 417 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 YAE1D1Q9NRH1 226 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
COL21A1-211ENST00000488912 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
COL21A1-211ENST00000488912 IGHV3-48P01763 117 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 PRH1P02810 166 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 DEFA4P12838 97 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 GUK1Q16774 197 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 SGMS2Q8NHU3 365 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 SMR3AQ99954 134 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 NPVFQ9HCQ7 196 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
COL21A1-211ENST00000488912 BAHCC1Q9P281 2608 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 NPIPB5A8MRT5 1133 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 FNDC10F2Z333 226 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 M0QZK8 103 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 CRYGCP07315 174 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 FHITP49789 147 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 ECSCRQ19T08 205 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 TEX29Q8N6K0 151 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 OR2T6Q8NHC8 308 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 CACNG8Q8WXS5 425 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 MGST2Q99735 147 aa8.6□□□□□ -1.03
COL21A1-211ENST00000488912 PSMG3Q9BT73 122 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-211ENST00000488912 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
COL21A1-211ENST00000488912 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 A0A087WWC5 75 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 UMAD1C9J7I0 102 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms