RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PUS1Q9Y606 427 aaKnown RBP eCLIP11.37□□□□□ -0.59
CXCL12-207ENST00000488591 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 IL5P05113 134 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 OR10J1P30954 320 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 BMI1P35226 326 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 SPANXN5Q5MJ07 72 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
CXCL12-207ENST00000488591 OR4D5Q8NGN0 318 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 WDR89Q96FK6 387 aaPredicted RBP11.36□□□□□ -0.59
CXCL12-207ENST00000488591 ACY3Q96HD9 319 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
CXCL12-207ENST00000488591 STRAPQ9Y3F4 350 aaKnown RBP11.36□□□□□ -0.59
CXCL12-207ENST00000488591 IGHV7-4-1A0A0J9YVY3 117 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 C5orf51A6NDU8 294 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
CXCL12-207ENST00000488591 CD81P60033 236 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 YPEL3P61236 119 aaPredicted RBP11.35□□□□□ -0.59
CXCL12-207ENST00000488591 POLR2GP62487 172 aaKnown RBP eCLIP11.35□□□□□ -0.59
CXCL12-207ENST00000488591 TIGITQ495A1 244 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 NRARPQ7Z6K4 114 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 Q8N1Y9 231 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 Q8WTZ3 238 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
CXCL12-207ENST00000488591 SSSCA1O60232 199 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 PRAF2O60831 178 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 IGKV1-17P01599 117 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 IGLC1P0CG04 106 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 NPPCP23582 126 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 NARS2Q96I59 477 aaKnown RBP11.34□□□□□ -0.59
CXCL12-207ENST00000488591 ZNF414Q96IQ9 312 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 RAB40CQ96S21 281 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 NEURL2Q9BR09 285 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 TUBA4BQ9H853 241 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 PSENENQ9NZ42 101 aa11.34□□□□□ -0.59
CXCL12-207ENST00000488591 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
CXCL12-207ENST00000488591 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 CCSO14618 274 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 CHEK1O14757 476 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 CD5P06127 495 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 FABP1P07148 127 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-207ENST00000488591 GAMTQ14353 236 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 GSG1LQ6UXU4 331 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 SMIM8Q96KF7 97 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 METTL26Q96S19 204 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-207ENST00000488591 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
CXCL12-207ENST00000488591 IGHV3-49A0A0A0MS15 119 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 A0A1W2PS18 150 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 ZFP92A6NM28 416 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 A8MZ25 164 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 H3BP45 60 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 TSPAN4O14817 238 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 RD3LP0DJH9 198 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 IGHV4-30-4P0DP06 118 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 TAS2R30P59541 319 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 MARVELD1Q9BSK0 173 aa11.32□□□□□ -0.6
CXCL12-207ENST00000488591 IGHV3OR16-13A0A075B7E8 117 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 IGHV3-74A0A0B4J1X5 117 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 SNRPGP15A8MWD9 76 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 L7N2F9 121 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 TOMM40O96008 361 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 MBPP02686 304 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-207ENST00000488591 CD7P09564 240 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 VAMP2P63027 116 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 RNF2Q99496 336 aa11.31□□□□□ -0.6
CXCL12-207ENST00000488591 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 TSC22D2O75157 780 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 IL4P05112 153 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 CRYBB3P26998 211 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 PAFAH1B2P68402 229 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 ASCL2Q99929 193 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 VSIRQ9H7M9 311 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 C19orf73Q9NVV2 129 aa11.3□□□□□ -0.6
CXCL12-207ENST00000488591 LSM5Q9Y4Y9 91 aaKnown RBP11.3□□□□□ -0.6
CXCL12-207ENST00000488591 APOHP02749 345 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-207ENST00000488591 PSG1P11464 419 aa11.29□□□□□ -0.6
CXCL12-207ENST00000488591 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-207ENST00000488591 RPL11P62913 178 aaKnown RBP11.29□□□□□ -0.6
CXCL12-207ENST00000488591 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
CXCL12-207ENST00000488591 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
CXCL12-207ENST00000488591 ST8SIA2Q92186 375 aa11.29□□□□□ -0.6
CXCL12-207ENST00000488591 TRGV9Q99603 122 aa11.29□□□□□ -0.6
CXCL12-207ENST00000488591 PFDN2Q9UHV9 154 aa11.29□□□□□ -0.6
CXCL12-207ENST00000488591 RCL1Q9Y2P8 373 aaKnown RBP11.29□□□□□ -0.6
CXCL12-207ENST00000488591 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
CXCL12-207ENST00000488591 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
CXCL12-207ENST00000488591 PAX9P55771 341 aa11.28□□□□□ -0.6
CXCL12-207ENST00000488591 CMC4P56277 68 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-207ENST00000488591 AKR1C1Q04828 323 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms