RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 PRSS54Q6PEW0 395 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 OR1S2Q8NGQ3 325 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 TRIM63Q969Q1 353 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 CSTL1Q9H114 145 aa17.02■□□□□ 0.32
CUL4A-209ENST00000488558 MPTX1A8MV57 137 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 DNASE2O00115 360 aaPredicted RBP17.01■□□□□ 0.31
CUL4A-209ENST00000488558 NPY1RP25929 384 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 AP3S2P59780 193 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 KLF9Q13886 244 aaPredicted RBP17.01■□□□□ 0.31
CUL4A-209ENST00000488558 TIGITQ495A1 244 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 GATAD1Q8WUU5 269 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 TMEM170AQ8WVE7 144 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 DEDD2Q8WXF8 326 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 NARS2Q96I59 477 aaKnown RBP17.01■□□□□ 0.31
CUL4A-209ENST00000488558 HSPB7Q9UBY9 170 aa17.01■□□□□ 0.31
CUL4A-209ENST00000488558 ALMS1Q8TCU4 4167 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 IGHV3-66A0A0C4DH42 116 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 AKR1C4P17516 323 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 RND2P52198 227 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 YPEL3P61236 119 aaPredicted RBP17■□□□□ 0.31
CUL4A-209ENST00000488558 SMCO1Q147U7 214 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 LGI3Q8N145 548 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 TMEM217Q8N7C4 229 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 V9GYH0 126 aa17■□□□□ 0.31
CUL4A-209ENST00000488558 PLECQ15149 4684 aaKnown RBP17■□□□□ 0.31
CUL4A-209ENST00000488558 P2RY1P47900 373 aa16.99■□□□□ 0.31
CUL4A-209ENST00000488558 RPL11P62913 178 aaKnown RBP16.99■□□□□ 0.31
CUL4A-209ENST00000488558 GRAMD2BQ96HH9 432 aa16.99■□□□□ 0.31
CUL4A-209ENST00000488558 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
CUL4A-209ENST00000488558 U3KQ87 197 aa16.99■□□□□ 0.31
CUL4A-209ENST00000488558 DUXBA0A1W2PPF3 345 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 NUPR2A6NF83 97 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 OR10J1P30954 320 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 ATP5IP56385 69 aaPredicted RBP16.98■□□□□ 0.31
CUL4A-209ENST00000488558 LYZL2Q7Z4W2 148 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 TOMM5Q8N4H5 51 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 Q8WTZ3 238 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 U3KQE9 123 aa16.98■□□□□ 0.31
CUL4A-209ENST00000488558 K7EQG2 157 aa16.97■□□□□ 0.31
CUL4A-209ENST00000488558 NXPH3O95157 252 aa16.97■□□□□ 0.31
CUL4A-209ENST00000488558 DEFB131AP59861 70 aa16.97■□□□□ 0.31
CUL4A-209ENST00000488558 EWSR1Q01844 656 aaKnown RBP eCLIP16.97■□□□□ 0.31
CUL4A-209ENST00000488558 PYDC2Q56P42 97 aa16.97■□□□□ 0.31
CUL4A-209ENST00000488558 DTD1Q8TEA8 209 aa16.97■□□□□ 0.31
CUL4A-209ENST00000488558 RABAC1Q9UI14 185 aa16.97■□□□□ 0.31
CUL4A-209ENST00000488558 CXorf65A6NEN9 183 aa16.96■□□□□ 0.31
CUL4A-209ENST00000488558 IFNA10P01566 189 aa16.96■□□□□ 0.31
CUL4A-209ENST00000488558 S100A5P33763 92 aa16.96■□□□□ 0.31
CUL4A-209ENST00000488558 EIF2B2P49770 351 aaKnown RBP16.96■□□□□ 0.31
CUL4A-209ENST00000488558 ZNF79Q15937 498 aa16.96■□□□□ 0.31
CUL4A-209ENST00000488558 TMEM128Q5BJH2 165 aa16.96■□□□□ 0.31
CUL4A-209ENST00000488558 FAM24BQ8N5W8 94 aa16.96■□□□□ 0.31
CUL4A-209ENST00000488558 SLC25A21Q9BQT8 299 aaPredicted RBP16.96■□□□□ 0.31
CUL4A-209ENST00000488558 HELTA6NFD8 242 aa16.95■□□□□ 0.3
CUL4A-209ENST00000488558 HNRNPCP07910 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
CUL4A-209ENST00000488558 RBMS2Q15434 407 aaKnown RBP16.95■□□□□ 0.3
CUL4A-209ENST00000488558 CCDC190Q86UF4 302 aa16.95■□□□□ 0.3
CUL4A-209ENST00000488558 STXBP6Q8NFX7 210 aa16.95■□□□□ 0.3
CUL4A-209ENST00000488558 DCANP1Q8TF63 244 aa16.95■□□□□ 0.3
CUL4A-209ENST00000488558 RBM38Q9H0Z9 239 aaKnown RBP16.95■□□□□ 0.3
CUL4A-209ENST00000488558 RBKSQ9H477 322 aa16.95■□□□□ 0.3
CUL4A-209ENST00000488558 CCDC160A6NGH7 325 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 TOMM40O96008 361 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 PMS2P11Q13670 270 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 LEMD1Q68G75 181 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 TMED4Q7Z7H5 227 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 LRTM2Q8N967 370 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 NPIPB3Q92617 1050 aa16.94■□□□□ 0.3
CUL4A-209ENST00000488558 HYDINQ4G0P3 5121 aa16.93■□□□□ 0.3
CUL4A-209ENST00000488558 ZNF701M0R085 212 aaPredicted RBP16.93■□□□□ 0.3
CUL4A-209ENST00000488558 CA1P00915 261 aaPredicted RBP16.93■□□□□ 0.3
CUL4A-209ENST00000488558 AP2S1P53680 142 aaPredicted RBP16.93■□□□□ 0.3
CUL4A-209ENST00000488558 C16orf54Q6UWD8 224 aa16.93■□□□□ 0.3
CUL4A-209ENST00000488558 OR1S1Q8NH92 325 aa16.93■□□□□ 0.3
CUL4A-209ENST00000488558 GLMPQ8WWB7 406 aa16.93■□□□□ 0.3
CUL4A-209ENST00000488558 ACY3Q96HD9 319 aa16.93■□□□□ 0.3
CUL4A-209ENST00000488558 RARRES2Q99969 163 aa16.93■□□□□ 0.3
CUL4A-209ENST00000488558 C11orf68Q9H3H3 251 aaKnown RBP16.93■□□□□ 0.3
CUL4A-209ENST00000488558 PITX3O75364 302 aa16.92■□□□□ 0.3
CUL4A-209ENST00000488558 IL4P05112 153 aa16.92■□□□□ 0.3
CUL4A-209ENST00000488558 SLC25A6P12236 298 aa16.92■□□□□ 0.3
CUL4A-209ENST00000488558 USF2Q15853 346 aaPredicted RBP16.92■□□□□ 0.3
CUL4A-209ENST00000488558 CEMP1Q6PRD7 247 aaPredicted RBP16.92■□□□□ 0.3
CUL4A-209ENST00000488558 STHQ8IWL8 128 aa16.92■□□□□ 0.3
CUL4A-209ENST00000488558 FAM90A26D6RGX4 464 aa16.91■□□□□ 0.3
CUL4A-209ENST00000488558 RD3LP0DJH9 198 aa16.91■□□□□ 0.3
CUL4A-209ENST00000488558 GPX4P36969 197 aaPredicted RBP16.91■□□□□ 0.3
CUL4A-209ENST00000488558 TMEM41BQ5BJD5 291 aa16.91■□□□□ 0.3
CUL4A-209ENST00000488558 TRPT1Q86TN4 253 aaKnown RBP16.91■□□□□ 0.3
CUL4A-209ENST00000488558 VAMP1P23763 118 aa16.9■□□□□ 0.3
CUL4A-209ENST00000488558 NUP62P37198 522 aaPredicted RBP16.9■□□□□ 0.3
CUL4A-209ENST00000488558 OR11H2Q8NH07 326 aa16.9■□□□□ 0.3
CUL4A-209ENST00000488558 LINC00476Q8WZB0 136 aa16.9■□□□□ 0.3
CUL4A-209ENST00000488558 SEPSECSQ9HD40 501 aaKnown RBP16.9■□□□□ 0.3
CUL4A-209ENST00000488558 IFNA4P05014 189 aa16.89■□□□□ 0.29
CUL4A-209ENST00000488558 ZNF688P0C7X2 276 aa16.89■□□□□ 0.29
CUL4A-209ENST00000488558 SPP1P10451 314 aa16.89■□□□□ 0.29
CUL4A-209ENST00000488558 PSG1P11464 419 aa16.89■□□□□ 0.29
CUL4A-209ENST00000488558 SPANXN2Q5MJ10 180 aa16.89■□□□□ 0.29
CUL4A-209ENST00000488558 MORN3Q6PF18 240 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms