RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	KLK9	Q2XQG4	91 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	TIGIT	Q495A1	244 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	PATE2	Q6UY27	113 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	LHFPL4	Q7Z7J7	247 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	OR10G8	Q8NGN5	311 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	C2CD4C	Q8TF44	421 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	ARPC1A	Q92747	370 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	BPESC1	Q9GZL8	116 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	TMEM14C	Q9P0S9	112 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	KLK9	Q9UKQ9	250 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	ATRX	P46100	2492 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	ABCA4	P78363	2273 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	IGHV4-39	P01824	125 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	IGLC1	P0CG04	106 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	TMEM11	P17152	192 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	RPL35	P42766	123 aa	Known RBP	11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	GNG4	P50150	75 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	YPEL3	P61236	119 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	SNRPE	P62304	92 aa	Known RBP	11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	ZNF90	Q03938	601 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	LINC00305	Q7Z4B0	112 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	LINC00518	Q8N0U6	118 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	TBX15	Q96SF7	602 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	CCL19	Q99731	98 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	TXN2	Q99757	166 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	RASL11B	Q9BPW5	248 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	HIGD1A	Q9Y241	93 aa		11.15	□□□□□ -0.62
UBA7-208	ENST00000488536	HIVEP3	Q5T1R4	2406 aa		11.15	□□□□□ -0.63
UBA7-208	ENST00000488536	NDUFS7	O75251	213 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	HLA-DRB1	P01911	266 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	PAX1	P15863	534 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	FCGR2B	P31994	310 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	PLA2G5	P39877	138 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	COX19	Q49B96	90 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	TEX38	Q6PEX7	206 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	FAM168A	Q92567	244 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	FXYD5	Q96DB9	178 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	MRPL36	Q9P0J6	103 aa	Known RBP	11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	CDC42EP3	Q9UKI2	254 aa		11.14	□□□□□ -0.63
UBA7-208	ENST00000488536	TRBV20OR9-2	A0A075B6H5	130 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	IGLV11-55	A0A075B6I3	123 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	VWC2L	B2RUY7	222 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	GGTLC3	B5MD39	225 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536		K7EIM0	57 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	TOMM40	O96008	361 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	HOXA5	P20719	270 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	CNN1	P51911	297 aa	Known RBP	11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	MFAP4	P55083	255 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	SUMO1	P63165	101 aa	Known RBP	11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	CX3CL1	P78423	397 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	PAX8	Q06710	450 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	CLEC2A	Q6UVW9	174 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	OR1B1	Q8NGR6	318 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	OCC1	Q8TAD7	63 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	C10orf105	Q8TEF2	133 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	CHRDL1	Q9BU40	450 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	DERL1	Q9BUN8	251 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	OSTC	Q9NRP0	149 aa		11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	TPR	P12270	2363 aa	Known RBP	11.13	□□□□□ -0.63
UBA7-208	ENST00000488536	CHD8	Q9HCK8	2581 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	ISLR	O14498	428 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	NPFF	O15130	113 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	TRGC2	P03986	189 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	SMIM6	P0DI80	62 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	RD3L	P0DJH9	198 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	ORM2	P19652	201 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	CRYBB3	P26998	211 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	MYCNOS	P40205	109 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	AKR1D1	P51857	326 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	PRB3	Q04118	309 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	FABP9	Q0Z7S8	132 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	RBM14	Q96PK6	669 aa	Known RBP	11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	GAR1	Q9NY12	217 aa	Known RBP	11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	IL36B	Q9NZH7	164 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	MRPL27	Q9P0M9	148 aa	Known RBP	11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	DMRT1	Q9Y5R6	373 aa		11.12	□□□□□ -0.63
UBA7-208	ENST00000488536	NCBP2L	A6PVI3	153 aa	Known RBP	11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BK	O60814	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	GCG	P01275	180 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BJ	P06899	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BO	P23527	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BB	P33778	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	CDX1	P47902	265 aa	Predicted RBP	11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BD	P58876	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BC	P62807	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST2H2BE	Q16778	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	CENPW	Q5EE01	88 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	ZNF329	Q86UD4	541 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	LYPD1	Q8N2G4	141 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	VN1R17P	Q8TDU5	208 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BH	Q93079	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	ATP6V0B	Q99437	205 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BN	Q99877	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	HIST1H2BM	Q99879	126 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	PITPNC1	Q9UKF7	332 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	COL6A6	A6NMZ7	2263 aa		11.11	□□□□□ -0.63
UBA7-208	ENST00000488536	PKD1L2	Q7Z442	2459 aa		11.1	□□□□□ -0.63
UBA7-208	ENST00000488536	TRBV9	A0A0B4J1U6	114 aa		11.1	□□□□□ -0.63
UBA7-208	ENST00000488536	TRAV5	A0A0B4J249	113 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms