RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SRSF12Q8WXF0 261 aaKnown RBP16.09■□□□□ 0.17
NECAB3-213ENST00000488489 PYGO2Q9BRQ0 406 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 A0A096LNT2 108 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 FNDC10F2Z333 226 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 FABP4P15090 132 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 RUSC1-AS1Q66K80 236 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 C16orf82Q7Z2V1 217 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 OR10G9Q8NGN4 311 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 OR10G7Q8NGN6 311 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 FNDC4Q9H6D8 234 aaPredicted RBP16.09■□□□□ 0.17
NECAB3-213ENST00000488489 PITPNC1Q9UKF7 332 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 MBP02144 154 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 PFN1P07737 140 aaKnown RBP16.08■□□□□ 0.16
NECAB3-213ENST00000488489 PSMB3P49720 205 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 MFAP2P55001 183 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 C5orf64Q2M2E5 130 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 MIC13Q5XKP0 118 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 SSMEM1Q8WWF3 244 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 SLC25A22Q9H936 323 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 MANBALQ9NQG1 85 aa16.08■□□□□ 0.16
NECAB3-213ENST00000488489 SLC25A16P16260 332 aa16.07■□□□□ 0.16
NECAB3-213ENST00000488489 OPRK1P41145 380 aa16.07■□□□□ 0.16
NECAB3-213ENST00000488489 OR2T6Q8NHC8 308 aa16.07■□□□□ 0.16
NECAB3-213ENST00000488489 HMGB3O15347 200 aaKnown RBP16.07■□□□□ 0.16
NECAB3-213ENST00000488489 RPL23P62829 140 aaKnown RBP16.07■□□□□ 0.16
NECAB3-213ENST00000488489 TMEM144Q7Z5S9 345 aa16.07■□□□□ 0.16
NECAB3-213ENST00000488489 OR4X1Q8NH49 305 aa16.07■□□□□ 0.16
NECAB3-213ENST00000488489 CSPG4Q6UVK1 2322 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 IGHV3-48P01763 117 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 SUB1P53999 127 aaKnown RBP eCLIP16.06■□□□□ 0.16
NECAB3-213ENST00000488489 HIST2H2BCQ6DN03 193 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 ZNF114Q8NC26 417 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 RNASEH2CQ8TDP1 164 aaKnown RBP16.06■□□□□ 0.16
NECAB3-213ENST00000488489 RPUSD4Q96CM3 377 aaKnown RBP16.06■□□□□ 0.16
NECAB3-213ENST00000488489 PACRGQ96M98 296 aaPredicted RBP16.06■□□□□ 0.16
NECAB3-213ENST00000488489 HIST1H2BLQ99880 126 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 PARLQ9H300 379 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 PXMP4Q9Y6I8 212 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 TRAV40A0A0B4J280 105 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 NCBP2LA6PVI3 153 aaKnown RBP16.06■□□□□ 0.16
NECAB3-213ENST00000488489 B4DSR2 109 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 CNIH1O95406 144 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 TMEM11P17152 192 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 GPX4P36969 197 aaPredicted RBP16.06■□□□□ 0.16
NECAB3-213ENST00000488489 DEFA6Q01524 100 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 PVRIGQ6DKI7 326 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 BRD3OSQ6XYD6 125 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 TMEM183AQ8IXX5 376 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 CACNG8Q8WXS5 425 aa16.06■□□□□ 0.16
NECAB3-213ENST00000488489 IGHV1-69DA0A0B4J2H0 117 aa16.05■□□□□ 0.16
NECAB3-213ENST00000488489 IGHV1-69P01742 117 aa16.05■□□□□ 0.16
NECAB3-213ENST00000488489 PSMG3-AS1Q96PY0 264 aa16.05■□□□□ 0.16
NECAB3-213ENST00000488489 ACTR3CQ9C0K3 210 aaPredicted RBP16.05■□□□□ 0.16
NECAB3-213ENST00000488489 C7orf69Q9H7B7 122 aa16.05■□□□□ 0.16
NECAB3-213ENST00000488489 HIF1ANQ9NWT6 349 aa16.05■□□□□ 0.16
NECAB3-213ENST00000488489 MRPL36Q9P0J6 103 aaKnown RBP16.05■□□□□ 0.16
NECAB3-213ENST00000488489 H7BYZ3 331 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 FAM106CPP0CH98 169 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 IGHV4-38-2P0DP08 117 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 DEFB113Q30KQ7 82 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 OR51G1Q8NGK1 321 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 FAM103A1Q9BTL3 118 aaKnown RBP16.04■□□□□ 0.16
NECAB3-213ENST00000488489 GALR1P47211 349 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 FXYD3Q14802 87 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 ACOT6Q3I5F7 207 aaPredicted RBP16.04■□□□□ 0.16
NECAB3-213ENST00000488489 MRPL41Q8IXM3 137 aaKnown RBP16.04■□□□□ 0.16
NECAB3-213ENST00000488489 STPG3Q8N7X2 389 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 MAPK1IP1LQ8NDC0 245 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 RAB24Q969Q5 203 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 OR5B12Q96R08 314 aa16.04■□□□□ 0.16
NECAB3-213ENST00000488489 ZNF469Q96JG9 3925 aaPredicted RBP16.03■□□□□ 0.16
NECAB3-213ENST00000488489 AVPP01185 164 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 OR1P1Q8NH06 330 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 OR5R1Q8NH85 324 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 ACY3Q96HD9 319 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 GCN1Q92616 2671 aaKnown RBP16.03■□□□□ 0.16
NECAB3-213ENST00000488489 BRS3P32247 399 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 RPL29P47914 159 aaKnown RBP16.03■□□□□ 0.16
NECAB3-213ENST00000488489 CX3CL1P78423 397 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 PRR20EP86478 221 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 PRR20CP86479 221 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 PRR20DP86480 221 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 PRR20BP86481 221 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 PRR20AP86496 221 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 NECAP1Q8NC96 275 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 OR4F5Q8NH21 305 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 OR4F4Q96R69 305 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 BEX4Q9NWD9 120 aaPredicted RBP16.03■□□□□ 0.16
NECAB3-213ENST00000488489 SLC45A2Q9UMX9 530 aa16.03■□□□□ 0.16
NECAB3-213ENST00000488489 F11RQ9Y624 299 aaKnown RBP16.03■□□□□ 0.16
NECAB3-213ENST00000488489 LINC00869P0C866 280 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 GATA2P23769 480 aaPredicted RBP16.02■□□□□ 0.16
NECAB3-213ENST00000488489 NDPQ00604 133 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 RAB31Q13636 194 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 COA6Q5JTJ3 125 aaKnown RBP16.02■□□□□ 0.16
NECAB3-213ENST00000488489 Q8N9W7 124 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 GATAD1Q8WUU5 269 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 ANAPC16Q96DE5 110 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 MISP3Q96FF7 219 aa16.02■□□□□ 0.16
NECAB3-213ENST00000488489 SOX21Q9Y651 276 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms