RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ZC4H2Q9NQZ6 224 aa7.93□□□□□ -1.14
SKA1-204ENST00000488454 LYRM2Q9NU23 88 aaPredicted RBP7.93□□□□□ -1.14
SKA1-204ENST00000488454 OR5AC2Q9NZP5 309 aa7.93□□□□□ -1.14
SKA1-204ENST00000488454 SMCO3A2RU48 225 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 CLN5O75503 358 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 CST7O76096 145 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 OR2C1O95371 312 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 TSPAN15O95858 294 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 HOXD3P31249 432 aaPredicted RBP7.92□□□□□ -1.14
SKA1-204ENST00000488454 S100A11P31949 105 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 RND2P52198 227 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 RELQ04864 619 aaPredicted RBP7.92□□□□□ -1.14
SKA1-204ENST00000488454 TMEM252Q8N6L7 170 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 TMEM116Q8NCL8 245 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 OR2T35Q8NGX2 323 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 NPIPB3Q92617 1050 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 RNF126Q9BV68 326 aa7.92□□□□□ -1.14
SKA1-204ENST00000488454 ZNF320A2RRD8 509 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 ZFP92A6NM28 416 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 H0YIZ8 118 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 BMPR1BO00238 502 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 FABP1P07148 127 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 CTSGP08311 255 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 SULT1A1P50225 295 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 SLURP1P55000 103 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 AKR1C1Q04828 323 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 FHL3Q13643 280 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 GAMTQ14353 236 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 REC114Q7Z4M0 266 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 GPHB5Q86YW7 130 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 LILRB2Q8N423 598 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 TMEM217Q8N7C4 229 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 OR1S2Q8NGQ3 325 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 CHAC2Q8WUX2 184 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 GGACTQ9BVM4 153 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 C11orf1Q9H5F2 150 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 MBD2Q9UBB5 411 aa7.91□□□□□ -1.14
SKA1-204ENST00000488454 IGHV3-35A0A0C4DH35 117 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 IGSF23A1L1A6 192 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 PMS2P5A8MQ11 134 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 FNDC10F2Z333 226 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 OVOL1O14753 267 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 YIF1AO95070 293 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 RPL12P30050 165 aaKnown RBP7.9□□□□□ -1.14
SKA1-204ENST00000488454 OR10J1P30954 320 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 SYNJ2BPP57105 145 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 DLK1P80370 383 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 BAXQ07812 192 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 SLC38A11Q08AI6 406 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 KLF5Q13887 457 aaPredicted RBP7.9□□□□□ -1.14
SKA1-204ENST00000488454 ATP6V1FQ16864 119 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 ACOT7LQ6ZUV0 252 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 ZNF546Q86UE3 836 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 C1QL4Q86Z23 238 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 INO80EQ8NBZ0 244 aaPredicted RBP7.9□□□□□ -1.14
SKA1-204ENST00000488454 Q8WTZ3 238 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 DLX4Q92988 240 aaPredicted RBP7.9□□□□□ -1.14
SKA1-204ENST00000488454 CHRDL1Q9BU40 450 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 ELOVL1Q9BW60 279 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 NPVFQ9HCQ7 196 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 MRPL36Q9P0J6 103 aaKnown RBP7.9□□□□□ -1.14
SKA1-204ENST00000488454 PEMTQ9UBM1 199 aa7.9□□□□□ -1.14
SKA1-204ENST00000488454 TENM1Q9UKZ4 2725 aa7.9□□□□□ -1.15
SKA1-204ENST00000488454 STAB1Q9NY15 2570 aa7.9□□□□□ -1.15
SKA1-204ENST00000488454 TRAV14DV4A0A0A6YYC5 116 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 PRSS46E5RG02 174 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 NDUFA4O00483 81 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 CCNKO75909 580 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 RD3LP0DJH9 198 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 LYL1P12980 280 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 EWSR1Q01844 656 aaKnown RBP eCLIP7.89□□□□□ -1.15
SKA1-204ENST00000488454 NHLH2Q02577 135 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 ARL16Q0P5N6 197 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 RAB31Q13636 194 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 TIGITQ495A1 244 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 PRR31Q5SQ13 230 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 ZNF600Q6ZNG1 722 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 TMEM144Q7Z5S9 345 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 MCRIP2Q9BUT9 160 aaKnown RBP7.89□□□□□ -1.15
SKA1-204ENST00000488454 C20orf24Q9BUV8 137 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 UFC1Q9Y3C8 167 aa7.89□□□□□ -1.15
SKA1-204ENST00000488454 FXYD6-FXYD2A0A087WZ82 144 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 LGALS9O00182 355 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 PAX4O43316 350 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 YPEL3P61236 119 aaPredicted RBP7.88□□□□□ -1.15
SKA1-204ENST00000488454 Q5BKY6 102 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 HAPLN4Q86UW8 402 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 WFDC9Q8NEX5 89 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 OR9G4Q8NGQ1 327 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 TMEM147Q9BVK8 224 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 UQCC1Q9NVA1 299 aa7.88□□□□□ -1.15
SKA1-204ENST00000488454 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 H3BS24 57 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 TOMM40O96008 361 aa7.87□□□□□ -1.15
SKA1-204ENST00000488454 CFDP00746 253 aaPredicted RBP7.87□□□□□ -1.15
SKA1-204ENST00000488454 IGKV1-17P01599 117 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms