RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 SCGNO76038 276 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 ATP5G1P05496 136 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 ID1P41134 155 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 OPRK1P41145 380 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 ATP5G3P48201 142 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 ERVFC1-1P60608 527 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 HSPE1P61604 102 aaKnown RBP6.44□□□□□ -1.38
COL17A1-207ENST00000488320 MLANAQ16655 118 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 SIGLEC15Q6ZMC9 328 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 HOGA1Q86XE5 327 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 SAV1Q9H4B6 383 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-207ENST00000488320 SCN3BQ9NY72 215 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 U3KQE9 123 aa6.44□□□□□ -1.38
COL17A1-207ENST00000488320 TRAV1-2A0A0B4J238 106 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 CORTO00230 105 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 GNAO1P09471 354 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 RORCP51449 518 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 FCN2Q15485 313 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 RNASE12Q5GAN4 147 aaKnown RBP6.43□□□□□ -1.38
COL17A1-207ENST00000488320 EBLN2Q6P2I7 272 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 FOXI2Q6ZQN5 318 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 ZNF709Q8N972 641 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 OR4C16Q8NGL9 310 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 OR4X1Q8NH49 305 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 COQ8AQ8NI60 647 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 SCPEP1Q9HB40 452 aa6.43□□□□□ -1.38
COL17A1-207ENST00000488320 TRAV18A0A075B6X5 111 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 SMIM30A4D0T7 59 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 CBY3A6NI87 242 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 ZNF705GA8MUZ8 300 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-207ENST00000488320 PRM2P04554 102 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 LINC00315P59091 139 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 HAMPP81172 84 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 MLLT11Q13015 90 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-207ENST00000488320 OR5I1Q13606 314 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 SPATA31B1PQ5VZV4 182 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 SLC35G3Q8N808 338 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 OR5AP2Q8NGF4 316 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 OR6F1Q8NGZ6 308 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 ZNF2Q9BSG1 426 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-207ENST00000488320 ENY2Q9NPA8 101 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 MRPL36Q9P0J6 103 aaKnown RBP6.42□□□□□ -1.38
COL17A1-207ENST00000488320 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
COL17A1-207ENST00000488320 KRTAP29-1A8MX34 341 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-207ENST00000488320 GPR31O00270 319 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 GSTZ1O43708 216 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-207ENST00000488320 IGKV1-17P01599 117 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 IL4P05112 153 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 S100GP29377 79 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 DHODHQ02127 395 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 TMEM69Q5SWH9 247 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 FAM78BQ5VT40 261 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 OR1S2Q8NGQ3 325 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 FCGR1BQ92637 280 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 GNPNAT1Q96EK6 184 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-207ENST00000488320 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 ABHD1Q96SE0 405 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 MGLLQ99685 303 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 PDCD10Q9BUL8 212 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 EHFQ9NZC4 300 aa6.41□□□□□ -1.38
COL17A1-207ENST00000488320 HMCN2Q8NDA2 5059 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 F6UB75 175 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 EBAG9O00559 213 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 BUB3O43684 328 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 GCSHP23434 173 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 ZNF79Q15937 498 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 ESRGQ1W209 222 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 PHLDA2Q53GA4 152 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 PACRGLQ8N7B6 248 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 MRGPRFQ96AM1 343 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 IGF2BP2-AS1Q96M15 143 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 UPK3BQ9BT76 320 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 FNDC4Q9H6D8 234 aaPredicted RBP6.4□□□□□ -1.38
COL17A1-207ENST00000488320 C8orf4Q9NR00 106 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 KLK11Q9UBX7 282 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 TPRKBQ9Y3C4 175 aa6.4□□□□□ -1.38
COL17A1-207ENST00000488320 TRAV26-1A0A087WT03 109 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 A0A0J9YY99 117 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 PMP2P02689 132 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 RNASE2P10153 161 aaKnown RBP6.39□□□□□ -1.39
COL17A1-207ENST00000488320 HTN1P15515 57 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 OR10J1P30954 320 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 ETV6P41212 452 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 CBX5P45973 191 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 RPL5P46777 297 aaKnown RBP6.39□□□□□ -1.39
COL17A1-207ENST00000488320 RFX2P48378 723 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 PSMB3P49720 205 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 YPEL3P61236 119 aaPredicted RBP6.39□□□□□ -1.39
COL17A1-207ENST00000488320 C22orf42Q6IC83 251 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 DHRS11Q6UWP2 260 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 IFT46Q9NQC8 304 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 RHBDL2Q9NX52 303 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
COL17A1-207ENST00000488320 RRP15Q9Y3B9 282 aaKnown RBP6.39□□□□□ -1.39
COL17A1-207ENST00000488320 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms