RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SCAF4O95104 1147 aaKnown RBP12□□□□□ -0.49
C9orf3-219ENST00000488186 FABP1P07148 127 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 CSN3P07498 182 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 ELLP55199 621 aaPredicted RBP12□□□□□ -0.49
C9orf3-219ENST00000488186 AKR1C1Q04828 323 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 FCN2Q15485 313 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 TIGITQ495A1 244 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 TM4SF20Q53R12 229 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 TMEM14EPQ6UXP3 125 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 Q8WTZ3 238 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 PPP1R1CQ8WVI7 109 aa12□□□□□ -0.49
C9orf3-219ENST00000488186 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 FAM24AA6NFZ4 105 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 C2orf70A6NJV1 201 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 E5RGE8 158 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 DEDDO75618 318 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 FOLR2P14207 255 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 RRAS2P62070 204 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-219ENST00000488186 UNQ9165/PRO28630Q6UXU0 137 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 STX12Q86Y82 276 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 TMEM190Q8WZ59 177 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 MARC2Q969Z3 335 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 GINS3Q9BRX5 216 aa11.99□□□□□ -0.49
C9orf3-219ENST00000488186 DAZ1Q9NQZ3 744 aaKnown RBP11.99□□□□□ -0.49
C9orf3-219ENST00000488186 PUS1Q9Y606 427 aaKnown RBP eCLIP11.99□□□□□ -0.49
C9orf3-219ENST00000488186 ZNF207O43670 478 aaKnown RBP11.98□□□□□ -0.49
C9orf3-219ENST00000488186 CST7O76096 145 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 IGLC1P0CG04 106 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 RD3LP0DJH9 198 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 CXCL3P19876 107 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 CBLN1P23435 193 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 YPEL3P61236 119 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-219ENST00000488186 BEAN1Q3B7T3 259 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 TOMM20LQ6UXN7 152 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 SLC25A31Q9H0C2 315 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 LYRM2Q9NU23 88 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-219ENST00000488186 SIGLEC8Q9NYZ4 499 aa11.98□□□□□ -0.49
C9orf3-219ENST00000488186 MRPL27Q9P0M9 148 aaKnown RBP11.98□□□□□ -0.49
C9orf3-219ENST00000488186 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 A8MWP6 167 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 K7EMT4 169 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 CCNKO75909 580 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 MPC2O95563 127 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 IGKV1-17P01599 117 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 SULT1A1P50225 295 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 HBG1P69891 147 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 HBG2P69892 147 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 DLK1P80370 383 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 IL34Q6ZMJ4 242 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 LILRB2Q8N423 598 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 TMEM217Q8N7C4 229 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 OR11H7Q8NGC8 314 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 THAP6Q8TBB0 222 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 NARS2Q96I59 477 aaKnown RBP11.97□□□□□ -0.49
C9orf3-219ENST00000488186 TECRQ9NZ01 308 aaKnown RBP11.97□□□□□ -0.49
C9orf3-219ENST00000488186 OR5AC2Q9NZP5 309 aa11.97□□□□□ -0.49
C9orf3-219ENST00000488186 TMEM213A2RRL7 107 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 PRSS46E5RG02 174 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 S100A11P31949 105 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 BMI1P35226 326 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 P2RY1P47900 373 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 SLC38A11Q08AI6 406 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 TMEM252Q8N6L7 170 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 ASB13Q8WXK3 278 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 WDR89Q96FK6 387 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-219ENST00000488186 GGACTQ9BVM4 153 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 NPVFQ9HCQ7 196 aa11.96□□□□□ -0.49
C9orf3-219ENST00000488186 TOMM40O96008 361 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 NPPCP23582 126 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 FGL1Q08830 312 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 TMEM144Q7Z5S9 345 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 HAPLN4Q86UW8 402 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 METTL26Q96S19 204 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 TRGV9Q99603 122 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 C11orf1Q9H5F2 150 aa11.95□□□□□ -0.5
C9orf3-219ENST00000488186 IGSF23A1L1A6 192 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 FNDC10F2Z333 226 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 H0YIZ8 118 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 IGLV1-51P01701 117 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 IL4P05112 153 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 GIPP09681 153 aaPredicted RBP11.94□□□□□ -0.5
C9orf3-219ENST00000488186 EDN2P20800 178 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 ZNF90Q03938 601 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 EGFEM1PQ0D2K5 195 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 OR2F1Q13607 317 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 ATP6V1FQ16864 119 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 LAMTOR1Q6IAA8 161 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 LCN12Q6JVE5 192 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
C9orf3-219ENST00000488186 THAP8Q8NA92 274 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 OR51G1Q8NGK1 321 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 OR2K2Q8NGT1 345 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 PBDC1Q9BVG4 233 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 DNAH3Q8TD57 4116 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 SORL1Q92673 2214 aa11.94□□□□□ -0.5
C9orf3-219ENST00000488186 IGHV3-49A0A0A0MS15 119 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 IGHV7-4-1A0A0J9YVY3 117 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms