RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CBLN1P23435 193 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 RRAS2P62070 204 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 OXA1LQ15070 435 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 FCN2Q15485 313 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 RGS21Q2M5E4 152 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 LRRC37A5PQ49AS3 106 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 ZFAND3Q9H8U3 227 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 PUS1Q9Y606 427 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 NDUFA4O00483 81 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 OR10J1P30954 320 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 RAB11AP62491 216 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 CD300EQ496F6 205 aaPredicted RBP12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 ACOT7LQ6ZUV0 252 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 LILRB2Q8N423 598 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 OR5AC2Q9NZP5 309 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 PEMTQ9UBM1 199 aa12.96□□□□□ -0.33
SHROOM1-205ENST00000488072 PRKDCP78527 4128 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 A8MWP6 167 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 LY86O95711 162 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 ZNF90Q03938 601 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 DEFB114Q30KQ6 69 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 BTNL8Q6UX41 500 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 TMEM182Q6ZP80 229 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 TMEM116Q8NCL8 245 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 OR11H7Q8NGC8 314 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 ATP6V0BQ99437 205 aa12.95□□□□□ -0.34
SHROOM1-205ENST00000488072 IGSF23A1L1A6 192 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 C8orf88P0DMB2 117 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 SLC25A4P12235 298 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 GPX4P36969 197 aaPredicted RBP12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 BCAP31P51572 246 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 OR2F1Q13607 317 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 ZNF600Q6ZNG1 722 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 NOXA1Q86UR1 476 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 SLC35E1Q96K37 410 aa12.94□□□□□ -0.34
SHROOM1-205ENST00000488072 L7N2F9 121 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 CST7O76096 145 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 GATA2P23769 480 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 INSL3P51460 131 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 VAMP2P63027 116 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 RELQ04864 619 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 ETFRF1Q6IPR1 90 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 DYNLRB2Q8TF09 96 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 GPR61Q9BZJ8 451 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 UFC1Q9Y3C8 167 aa12.93□□□□□ -0.34
SHROOM1-205ENST00000488072 SMCO3A2RU48 225 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 ZNF785A8K8V0 405 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 TSC22D2O75157 780 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 SCAF4O95104 1147 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 GP9P14770 177 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 CAV2P51636 162 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 OR1S2Q8NGQ3 325 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 ST8SIA2Q92186 375 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 NMES1Q9C002 83 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 SIGLEC8Q9NYZ4 499 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 SMPXQ9UHP9 88 aa12.92□□□□□ -0.34
SHROOM1-205ENST00000488072 IGHV7-4-1A0A0J9YVY3 117 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 ZFP92A6NM28 416 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 PSG1P11464 419 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 TAS2R30P59541 319 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 USF2Q15853 346 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 Q5BKY6 102 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 TMEM217Q8N7C4 229 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 PPP1R1CQ8WVI7 109 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 RNF2Q99496 336 aa12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-205ENST00000488072 CHEK1O14757 476 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 DEDDO75618 318 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 ELLP55199 621 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 TMEM252Q8N6L7 170 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 STPG3Q8N7X2 389 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 THAP8Q8NA92 274 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 OR51G1Q8NGK1 321 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 MRAPQ8TCY5 172 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 RHPN1-AS1Q9BWJ2 59 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 MED28Q9H204 178 aa12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 MRPL27Q9P0M9 148 aaKnown RBP12.9□□□□□ -0.34
SHROOM1-205ENST00000488072 IGKV3-7A0A075B6H7 116 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 TRAV30A0A087WSZ9 112 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 TRAV14DV4A0A0A6YYC5 116 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 K7EMT4 169 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 TOMM40O96008 361 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 IL4P05112 153 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 RD3LP0DJH9 198 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 YPEL3P61236 119 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 NHLH2Q02577 135 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 AKR1C1Q04828 323 aa12.89□□□□□ -0.35
SHROOM1-205ENST00000488072 GUCA2BQ16661 112 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms