RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	LOC102723971	A0A1B0GUV8	181 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	IGHV3-48	P01763	117 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	OR5G3	P0C626	314 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	IGLC1	P0CG04	106 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	FCGR2B	P31994	310 aa	Predicted RBP	11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	IER3	P46695	156 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	MFAP4	P55083	255 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	TAS2R45	P59539	299 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	LY6E	Q16553	131 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	HAGH	Q16775	308 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	CCDC28A	Q8IWP9	274 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	OR5T1	Q8NG75	326 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	VAX2	Q9UIW0	290 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	ZNF580	Q9UK33	172 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	BRI3	O95415	125 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	IGHG2	P01859	326 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	PLP1	P60201	277 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	ZNF90	Q03938	601 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	ICAM4	Q14773	271 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	ECSCR	Q19T08	205 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	FAM78B	Q5VT40	261 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647		Q6YL49	198 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	BCL6B	Q8N143	479 aa	Predicted RBP	11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	RARRES2	Q99969	163 aa		11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	SEPSECS	Q9HD40	501 aa	Known RBP	11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	TECR	Q9NZ01	308 aa	Known RBP	11.57	□□□□□ -0.56
FGFR1-222	ENST00000487647	CR1	P17927	2039 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	TRBV9	A0A0B4J1U6	114 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	TRAV41	A0A0B4J266	112 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	PSMB11	A5LHX3	300 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647		C9JQL5	133 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	APOC3	P02656	99 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	GATA2	P23769	480 aa	Predicted RBP	11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	SVBP	Q8N300	66 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	TMEM37	Q8WXS4	190 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	TXNDC17	Q9BRA2	123 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	GAR1	Q9NY12	217 aa	Known RBP	11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	C21orf62	Q9NYP8	219 aa		11.56	□□□□□ -0.56
FGFR1-222	ENST00000487647	UNC79	Q9P2D8	2635 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	IGHV3-21	A0A0B4J1V1	117 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	COX7A2P2	O60397	106 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	ADCYAP1	P18509	176 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	YPEL3	P61236	119 aa	Predicted RBP	11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	C19orf54	Q5BKX5	351 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	PQLC2	Q6ZP29	291 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	NECAP1	Q8NC96	275 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	SUN5	Q8TC36	379 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	ATP6V0B	Q99437	205 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	FBXL7	Q9UJT9	491 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	NBPF19	A0A087WUL8	3843 aa		11.55	□□□□□ -0.56
FGFR1-222	ENST00000487647	LINC01548	A6NM66	108 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647		H3BUA1	57 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	HMGB3	O15347	200 aa	Known RBP	11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	GNG7	O60262	68 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	SRP19	P09132	144 aa	Known RBP	11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	C8orf88	P0DMB2	117 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	C10orf113	Q5VZT2	155 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	SPNS3	Q6ZMD2	512 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	CIART	Q8N365	385 aa	Predicted RBP	11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	RXFP4	Q8TDU9	374 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	TMEM167B	Q9NRX6	74 aa		11.54	□□□□□ -0.56
FGFR1-222	ENST00000487647	ABCA1	O95477	2261 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	MDFIC2	A0A1B0GVS7	189 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	AP4M1	O00189	453 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	SMAD7	O15105	426 aa	Known RBP	11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	HYPM	O75409	117 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	OR2J3	O76001	311 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	NDUFB8	O95169	186 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	IGKV1-17	P01599	117 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	IGHV4-59	P01825	116 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	RD3L	P0DJH9	198 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	ARL14EPL	P0DKL9	152 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	MEF2B	Q02080	365 aa	Predicted RBP	11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	C9orf152	Q5JTZ5	239 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	SOHLH1	Q5JUK2	328 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	S100A7A	Q86SG5	101 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	STXBP6	Q8NFX7	210 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	TMPRSS5	Q9H3S3	457 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	VPREB3	Q9UKI3	123 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	ARL2-SNX15	V9GYD0	113 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	MAP1A	P78559	2803 aa	Predicted RBP	11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	CSPG4	Q6UVK1	2322 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	SH2D7	A6NKC9	451 aa	Predicted RBP	11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647		G3V318	75 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	CD5L	O43866	347 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	SNAPIN	O95295	136 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	TOMM40	O96008	361 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	GCHFR	P30047	84 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	RHOG	P84095	191 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	DEFA5	Q01523	94 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	TIGIT	Q495A1	244 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	MIR17HG	Q75NE6	70 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	IQCF2	Q8IXL9	164 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	ZNF355P	Q9NSJ1	428 aa		11.53	□□□□□ -0.56
FGFR1-222	ENST00000487647	GCN1	Q92616	2671 aa	Known RBP	11.52	□□□□□ -0.56
FGFR1-222	ENST00000487647	FAM223B	A6NKX1	122 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	TMEM250	H0YL14	139 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	EIF3G	O75821	320 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	PSG1	P11464	419 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647		Q56UQ5	140 aa		11.52	□□□□□ -0.57

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