RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 FCGR1BQ92637 280 aa10.82□□□□□ -0.68
MCF2L-228ENST00000487354 TP53RKQ96S44 253 aa10.82□□□□□ -0.68
MCF2L-228ENST00000487354 FAT1Q14517 4588 aa10.82□□□□□ -0.68
MCF2L-228ENST00000487354 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 LOC100506127A0A0U1RQW1 187 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 BUB3O43684 328 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 NXPH3O95157 252 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 HTN3P15516 51 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-228ENST00000487354 HSPA13P48723 471 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 SNRPD3P62318 126 aaKnown RBP10.81□□□□□ -0.68
MCF2L-228ENST00000487354 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 TMEM69Q5SWH9 247 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 PRSS54Q6PEW0 395 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 GPX8Q8TED1 209 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 TMEM170AQ8WVE7 144 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 NARS2Q96I59 477 aaKnown RBP10.81□□□□□ -0.68
MCF2L-228ENST00000487354 YTHDF1Q9BYJ9 559 aaKnown RBP10.81□□□□□ -0.68
MCF2L-228ENST00000487354 SCRT2Q9NQ03 307 aa10.81□□□□□ -0.68
MCF2L-228ENST00000487354 NBDYA0A0U1RRE5 68 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 TEX48A0A1B0GUV7 120 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 IGKV3-20P01619 116 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 HOXA1P49639 335 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 EIF2B2P49770 351 aaKnown RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 AP2S1P53680 142 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 YPEL3P61236 119 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 RND3P61587 244 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 DHODHQ02127 395 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 LPCAT3Q6P1A2 487 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 GSG1LQ6UXU4 331 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 OR1S2Q8NGQ3 325 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 S100A16Q96FQ6 103 aaKnown RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 WDR12Q9GZL7 423 aaKnown RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 SLC35B3Q9H1N7 401 aa10.8□□□□□ -0.68
MCF2L-228ENST00000487354 SAV1Q9H4B6 383 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 YTHDF2Q9Y5A9 579 aaKnown RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-228ENST00000487354 TRAV30A0A087WSZ9 112 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 SOCS3O14543 225 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 TMEM127O75204 238 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 PI3P19957 117 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 PRSS3P35030 304 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 RND2P52198 227 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 SUB1P53999 127 aaKnown RBP eCLIP10.79□□□□□ -0.68
MCF2L-228ENST00000487354 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 C6orf223Q8N319 242 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 CLUHP3Q96NS8 147 aa10.79□□□□□ -0.68
MCF2L-228ENST00000487354 IL4P05112 153 aa10.78□□□□□ -0.68
MCF2L-228ENST00000487354 S100GP29377 79 aa10.78□□□□□ -0.68
MCF2L-228ENST00000487354 OR10J1P30954 320 aa10.78□□□□□ -0.68
MCF2L-228ENST00000487354 TSPAN5P62079 268 aa10.78□□□□□ -0.68
MCF2L-228ENST00000487354 ZNF79Q15937 498 aa10.78□□□□□ -0.68
MCF2L-228ENST00000487354 SAMD12Q8N8I0 201 aa10.78□□□□□ -0.68
MCF2L-228ENST00000487354 MYCBP2O75592 4640 aa10.77□□□□□ -0.68
MCF2L-228ENST00000487354 LOC102723971A0A1B0GUV8 181 aa10.77□□□□□ -0.69
MCF2L-228ENST00000487354 AKR1C2P52895 323 aa10.77□□□□□ -0.69
MCF2L-228ENST00000487354 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.69
MCF2L-228ENST00000487354 LHFPL1Q86WI0 220 aa10.77□□□□□ -0.69
MCF2L-228ENST00000487354 Q8WTZ3 238 aa10.77□□□□□ -0.69
MCF2L-228ENST00000487354 RAB26Q9ULW5 256 aa10.77□□□□□ -0.69
MCF2L-228ENST00000487354 M0QYG6 137 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 SCGB2A1O75556 95 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 TOMM40O96008 361 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 PIGPP57054 158 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 SPATA12Q7Z6I5 190 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 KRTAP1-5Q9BYS1 174 aa10.76□□□□□ -0.69
MCF2L-228ENST00000487354 F6UB75 175 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 RPS19P39019 145 aaKnown RBP10.75□□□□□ -0.69
MCF2L-228ENST00000487354 DAD1P61803 113 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 SP6Q3SY56 376 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 GPR146Q96CH1 333 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 PDCD10Q9BUL8 212 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 TMED3Q9Y3Q3 217 aa10.75□□□□□ -0.69
MCF2L-228ENST00000487354 VPS13BQ7Z7G8 4022 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 C3orf85A0A1B0GTC6 90 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 RPS10-NUDT3A0A1W2PQS6 291 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 A8MTW9 85 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 HBE1P02100 147 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 PRM2P04554 102 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 PSG1P11464 419 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 SLC25A4P12235 298 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 ELK1P19419 428 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 UCP1P25874 307 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 RCVRNP35243 200 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 HTR2BP41595 481 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 RORCP51449 518 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 PAX9P55771 341 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 SPCS3P61009 180 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 AMTNQ6UX39 209 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 OR51G1Q8NGK1 321 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 OR52E5Q8NH55 327 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 LHFPL5Q8TAF8 219 aa10.74□□□□□ -0.69
MCF2L-228ENST00000487354 RNASEH2CQ8TDP1 164 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms