RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 LAMTOR1Q6IAA8 161 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 Q8WTZ3 238 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 PSENENQ9NZ42 101 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
LIMS3-205ENST00000487150 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
LIMS3-205ENST00000487150 PRB2P02812 416 aaPredicted RBP11.1□□□□□ -0.63
LIMS3-205ENST00000487150 IGLC1P0CG04 106 aa11.1□□□□□ -0.63
LIMS3-205ENST00000487150 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
LIMS3-205ENST00000487150 DEFB114Q30KQ6 69 aa11.1□□□□□ -0.63
LIMS3-205ENST00000487150 CD300EQ496F6 205 aaPredicted RBP11.1□□□□□ -0.63
LIMS3-205ENST00000487150 TM4SF20Q53R12 229 aa11.1□□□□□ -0.63
LIMS3-205ENST00000487150 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
LIMS3-205ENST00000487150 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
LIMS3-205ENST00000487150 METTL26Q96S19 204 aa11.1□□□□□ -0.63
LIMS3-205ENST00000487150 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
LIMS3-205ENST00000487150 TRAV14DV4A0A0A6YYC5 116 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 A0A1W2PS18 150 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 FNDC10F2Z333 226 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 H3BP45 60 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 SSNA1O43805 119 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 CFDP00746 253 aaPredicted RBP11.09□□□□□ -0.63
LIMS3-205ENST00000487150 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 MBPP02686 304 aaPredicted RBP11.09□□□□□ -0.63
LIMS3-205ENST00000487150 PET100P0DJ07 73 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 PRR25Q96S07 402 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
LIMS3-205ENST00000487150 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
LIMS3-205ENST00000487150 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 WI2-2373I1.2A0A1W2PRP0 233 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 K7EIL1 84 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 GOSR2O14653 212 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 TOMM40O96008 361 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 RD3LP0DJH9 198 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 NPPCP23582 126 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 S100A7P31151 101 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 EIF2B2P49770 351 aaKnown RBP11.08□□□□□ -0.64
LIMS3-205ENST00000487150 S100A10P60903 97 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 GAMTQ14353 236 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 TOMM20LQ6UXN7 152 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 GRAMD2BQ96HH9 432 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
LIMS3-205ENST00000487150 NMES1Q9C002 83 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 MGAT4CQ9UBM8 478 aa11.08□□□□□ -0.64
LIMS3-205ENST00000487150 C7orf66A4D0T2 115 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 K7EPK0 472 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 RLN2P04090 185 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 DLK1P80370 383 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 AKR1C1Q04828 323 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 MLANAQ16655 118 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 GUCA2BQ16661 112 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 TIGITQ495A1 244 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 TMEM14EPQ6UXP3 125 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 ADAMTSL5Q6ZMM2 481 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 ACOT7LQ6ZUV0 252 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 TRGV9Q99603 122 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 GGACTQ9BVM4 153 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 MRPL36Q9P0J6 103 aaKnown RBP11.07□□□□□ -0.64
LIMS3-205ENST00000487150 MLXQ9UH92 298 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
LIMS3-205ENST00000487150 LSM5Q9Y4Y9 91 aaKnown RBP11.07□□□□□ -0.64
LIMS3-205ENST00000487150 TSPAN4O14817 238 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 BCAP31P51572 246 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 CAV2P51636 162 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 DEFB121Q5J5C9 76 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 OR8G2PQ6IF36 304 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 STX12Q86Y82 276 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 TMEM61Q8N0U2 210 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 OR51G1Q8NGK1 321 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
LIMS3-205ENST00000487150 OR4C46A6NHA9 309 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 PAFAH1B2P68402 229 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 HBG1P69891 147 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 HBG2P69892 147 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 S100A7AQ86SG5 101 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 THAP8Q8NA92 274 aa11.05□□□□□ -0.64
LIMS3-205ENST00000487150 IGHV3OR16-8A0A075B7F1 116 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 SMCO3A2RU48 225 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 CHEK1O14757 476 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 ZNF207O43670 478 aaKnown RBP11.04□□□□□ -0.64
LIMS3-205ENST00000487150 IL4P05112 153 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIMS3-205ENST00000487150 CRYBB3P26998 211 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 PAX9P55771 341 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 IL15RAQ13261 267 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 RAB32Q13637 225 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 RNF125Q96EQ8 232 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 WDR89Q96FK6 387 aaPredicted RBP11.04□□□□□ -0.64
LIMS3-205ENST00000487150 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
LIMS3-205ENST00000487150 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
LIMS3-205ENST00000487150 RABAC1Q9UI14 185 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms