RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 OR4C16Q8NGL9 310 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 OR5H2Q8NGV7 314 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 TERB2Q8NHR7 220 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 ENKURQ8TC29 256 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 LRRC20Q8TCA0 184 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 MRPL30Q8TCC3 161 aaKnown RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 NEK7Q8TDX7 302 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 CREB3L1Q96BA8 519 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 CCL13Q99616 98 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 PRRT1Q99946 306 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 SLC25A21Q9BQT8 299 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 HDHD3Q9BSH5 251 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 MARVELD1Q9BSK0 173 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF286AQ9HBT8 521 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 MYOZ1Q9NP98 299 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 NECAP2Q9NVZ3 263 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 MCUBQ9NWR8 336 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 KAAG1Q9UBP8 84 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF230Q9UIE0 474 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 SCP2D1Q9UJQ7 156 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 RCL1Q9Y2P8 373 aaKnown RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 NUBP2Q9Y5Y2 271 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 SMAD5-AS1Q9Y6J3 95 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 KIF25-AS1Q9Y6Z4 181 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 HRNRQ86YZ3 2850 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 CACNA1DQ01668 2161 aa2.77□□□□□ -1.97
PTCD3-216ENST00000487043 SPTAN1Q13813 2472 aaKnown RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 UTP20O75691 2785 aaKnown RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 SMG1Q96Q15 3661 aaKnown RBP2.77□□□□□ -1.97
PTCD3-216ENST00000487043 TANC2Q9HCD6 1990 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 PKDREJQ9NTG1 2253 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 LRRK2Q5S007 2527 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 MEIKINA0A087WXM9 373 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TRBV6-7A0A0A0MS04 114 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 IGKV1-6A0A0C4DH72 117 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 A0A1W2PPV4 95 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM30CPA0ZSE6 113 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CEACAM18A8MTB9 384 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 INMT-MINDY4F8WBC2 141 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 LYNX1G3V0Z9 82 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 SDCBPO00560 298 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-216ENST00000487043 FABP7O15540 132 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 NDUFB3O43676 98 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 HSBP1O75506 76 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 DHFRP00374 187 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 GYPAP02724 150 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TFF1P04155 84 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 SCTP09683 121 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CT45A6P0DMU7 189 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CT45A5P0DMU8 189 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CT45A7P0DMV0 189 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 OR5H8P0DN80 308 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CGB3P0DN86 165 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CGB7P0DN87 165 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 LYNX1P0DP58 116 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 COX6B1P14854 86 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 EFNA4P52798 201 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 NKX2-5P52952 324 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-216ENST00000487043 B2MP61769 119 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 MEF2CQ06413 473 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-216ENST00000487043 HMGN3Q15651 99 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM155Q4W5P6 130 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CT45A1Q5HYN5 189 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 AADACL3Q5VUY0 350 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF660Q6AZW8 331 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-216ENST00000487043 LYPD2Q6UXB3 125 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TEX43Q6ZNM6 134 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF493Q6ZR52 646 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 SLC36A1Q7Z2H8 476 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 LHFPL1Q86WI0 220 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 ZDHHC22Q8N966 263 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF565Q8N9K5 539 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 OR13C8Q8NGS7 320 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 CT45A3Q8NHU0 189 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 MAFIPQ8WZ33 124 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 RAB1CQ92928 201 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 MRGPRFQ96AM1 343 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 SCGB3A2Q96PL1 93 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 GAFA1Q96PS6 74 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 FOXC2Q99958 501 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 GINS4Q9BRT9 223 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TOLLIPQ9H0E2 274 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 ALX4Q9H161 411 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TAF9BQ9HBM6 251 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 OPN4Q9UHM6 478 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TRAPPC2LQ9UL33 140 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 LRBAP50851 2863 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 DSCAMO60469 2012 aa2.76□□□□□ -1.97
PTCD3-216ENST00000487043 TENM4Q6N022 2769 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TRAV6A0A075B6T7 132 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TRGV10A0A0A0MS01 117 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 hADV38S2A0JD32 116 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 ODAMA1E959 279 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 C7orf66A4D0T2 115 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 OR5H14A6NHG9 310 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 SNRPGP15A8MWD9 76 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 LEUTXA8MZ59 168 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 KRBOX1C9JBD0 128 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 C15orf65H3BRN8 121 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 K7EMT4 169 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms