RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.31□□□□□ -1.72
SF1-217ENST00000486960 OR10AD1Q8NGE0 317 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 OR4C3Q8NH37 302 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 PP6455Q8WZ26 134 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 FRZBQ92765 325 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 GALNT14Q96FL9 552 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 SRXN1Q9BYN0 137 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 GTSF1LQ9H1H1 148 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 MED28Q9H204 178 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 MOB1AQ9H8S9 216 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 JPT2Q9H910 190 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 CXorf21Q9HAI6 301 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 DAZ1Q9NQZ3 744 aaKnown RBP4.31□□□□□ -1.72
SF1-217ENST00000486960 DAZ3Q9NR90 486 aaKnown RBP4.31□□□□□ -1.72
SF1-217ENST00000486960 ZNF226Q9NYT6 803 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 SPRR3Q9UBC9 169 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 MTFP1Q9UDX5 166 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 MARCOQ9UEW3 520 aaPredicted RBP4.31□□□□□ -1.72
SF1-217ENST00000486960 PXMP4Q9Y6I8 212 aa4.31□□□□□ -1.72
SF1-217ENST00000486960 ANKRD12Q6UB98 2062 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 OVOL1O14753 267 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 FAM20BO75063 409 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 SS18L1O75177 396 aaPredicted RBP4.3□□□□□ -1.72
SF1-217ENST00000486960 CA2P00918 260 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 NGFP01138 241 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 PPIBP23284 216 aaKnown RBP4.3□□□□□ -1.72
SF1-217ENST00000486960 LPAR6P43657 344 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 ATP5G3P48201 142 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 S100A10P60903 97 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 LMO4P61968 165 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 PPP1CAP62136 330 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 MEF2BQ02080 365 aaPredicted RBP4.3□□□□□ -1.72
SF1-217ENST00000486960 ZNF404Q494X3 552 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 PYY3Q5JQD4 70 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 RPL22L1Q6P5R6 122 aaKnown RBP4.3□□□□□ -1.72
SF1-217ENST00000486960 IZUMO2Q6UXV1 221 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 Q8N3U1 123 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 RNF175Q8N4F7 328 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 OR4K5Q8NGD3 323 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 FLVCR1-AS1Q8TAF5 88 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 PRSS27Q9BQR3 290 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 RERGLQ9H628 205 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 RNF122Q9H9V4 155 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 RNF11Q9Y3C5 154 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 FIS1Q9Y3D6 152 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 MALRD1Q5VYJ5 2156 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 SPTBP11277 2137 aa4.3□□□□□ -1.72
SF1-217ENST00000486960 TRBV19A0A075B6N1 114 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 IGKV1-8A0A0C4DH67 115 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 TMEM269A0A1B0GVZ9 245 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 DHRS12A0PJE2 317 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 MEIS3P1A6NDR6 274 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 MSGN1A6NI15 193 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 TMEM212A6NML5 194 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 C12orf77C9JDV5 145 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 IGHV3-9P01782 118 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 FRMD6-AS1P0C7T7 363 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 OR12D1P0DN82 309 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 LAMP1P11279 417 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 CTSEP14091 401 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 HIST1H1DP16402 221 aaKnown RBP4.29□□□□□ -1.72
SF1-217ENST00000486960 CCL1P22362 96 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 SRPXP78539 464 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 HSD52Q0P140 79 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 Q499Y3 187 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.29□□□□□ -1.72
SF1-217ENST00000486960 FAM222AQ5U5X8 452 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 LINC00299Q6ZSB3 139 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 ATP5L2Q7Z4Y8 100 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 C17orf82Q86X59 251 aaPredicted RBP4.29□□□□□ -1.72
SF1-217ENST00000486960 ZCCHC24Q8N2G6 241 aaKnown RBP4.29□□□□□ -1.72
SF1-217ENST00000486960 ZNRF1Q8ND25 227 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 LY6G5BQ8NDX9 201 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 OR10J6PQ8NGY7 276 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 CCL17Q92583 94 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 FAM3DQ96BQ1 224 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 F2RL3Q96RI0 385 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 NMNAT3Q96T66 252 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 GINS4Q9BRT9 223 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 DNAJC15Q9Y5T4 150 aa4.29□□□□□ -1.72
SF1-217ENST00000486960 TRAV8-3A0A0A6YYJ7 113 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 TRAV8-1A0A0A6YYK1 113 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 TRAV4A0A0B4J268 109 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 LOC100130705A0A1B0GUX0 176 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 BBIP1A8MTZ0 92 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 NPFFO15130 113 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 LINC00032P0C843 101 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 HLA-DOBP13765 273 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 ZFP36P26651 326 aaKnown RBP4.28□□□□□ -1.72
SF1-217ENST00000486960 ETV6P41212 452 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 GFERP55789 205 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 BRWD1-AS2P59051 145 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 DEFA3P59666 94 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 UBE2NP61088 152 aaKnown RBP4.28□□□□□ -1.72
SF1-217ENST00000486960 SLC38A11Q08AI6 406 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 DHRS2Q13268 280 aa4.28□□□□□ -1.72
SF1-217ENST00000486960 ENDOGQ14249 297 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms