RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NUDT3O95989 172 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 LINC00614P0C842 121 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 TCTEX1D1Q8N7M0 179 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 FLYWCH2Q96CP2 140 aaKnown RBP10.08□□□□□ -0.8
HSPG2-211ENST00000486901 CCDC168Q8NDH2 2452 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 IGHV2OR16-5A0A0B4J2B6 119 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 COX7A2P2O60397 106 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 SAA1P0DJI8 122 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-211ENST00000486901 TMEM116Q8NCL8 245 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 OR1B1Q8NGR6 318 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 ALKBH7Q9BT30 221 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-211ENST00000486901 BET1LQ9NYM9 111 aa10.08□□□□□ -0.8
HSPG2-211ENST00000486901 MALRD1Q5VYJ5 2156 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 IGHV1-18A0A0C4DH31 117 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 OR2T8A6NH00 312 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 M0R296 226 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
HSPG2-211ENST00000486901 KIR2DL2P43627 348 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-211ENST00000486901 GAGE1Q13065 139 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-211ENST00000486901 TNFRSF19Q9NS68 423 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 TEX50A0A1B0GTY4 177 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 C9JCJ5 164 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 ENSAO43768 121 aaKnown RBP10.07□□□□□ -0.8
HSPG2-211ENST00000486901 WDR73Q6P4I2 378 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 ZNF835Q9Y2P0 537 aa10.07□□□□□ -0.8
HSPG2-211ENST00000486901 MGST3O14880 152 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 KLK10O43240 276 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 C8orf88P0DMB2 117 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 UQCRFS1P47985 274 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 C17orf58Q2M2W7 97 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 SLC25A33Q9BSK2 321 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 TMEM167BQ9NRX6 74 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 PTPRBP23467 1997 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 ANKHD1Q8IWZ3 2542 aaKnown RBP10.06□□□□□ -0.8
HSPG2-211ENST00000486901 A0A087X0K7 114 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 FAM90A1Q86YD7 464 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
HSPG2-211ENST00000486901 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 VPS25Q9BRG1 176 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 TNRC6BQ9UPQ9 1833 aaKnown RBP10.06□□□□□ -0.8
HSPG2-211ENST00000486901 PGPA6NDG6 321 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 OR4C46A6NHA9 309 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 UBE2G1P62253 170 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 LDLRAD2Q5SZI1 272 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 Q6ZT83 130 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 RBMXL3Q8N7X1 1067 aaKnown RBP10.06□□□□□ -0.8
HSPG2-211ENST00000486901 ZNF738Q8NE65 137 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 PAXXQ9BUH6 204 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 TPSG1Q9NRR2 321 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 JPT1Q9UK76 154 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 S4R3C0 116 aa10.06□□□□□ -0.8
HSPG2-211ENST00000486901 LOC105371242A0A075B767 164 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 PSG1P11464 419 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 RPL19P84098 196 aaKnown RBP10.05□□□□□ -0.8
HSPG2-211ENST00000486901 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
HSPG2-211ENST00000486901 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-211ENST00000486901 AKAP13Q12802 2813 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 ESDP10768 282 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 PPOXP50336 477 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 FBLN7Q53RD9 439 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 MDS2Q8NDY4 140 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 FDCSPQ8NFU4 85 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 SLC25A2Q9BXI2 301 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 OSTCQ9NRP0 149 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 IZUMO1RA6ND01 250 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 CT45A6P0DMU7 189 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 CT45A5P0DMU8 189 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 CT45A7P0DMV0 189 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 RBX1P62877 108 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 INO80CQ6PI98 192 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-211ENST00000486901 C22orf34Q6ZV56 151 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 ARHGAP32A7KAX9 2087 aa10.05□□□□□ -0.8
HSPG2-211ENST00000486901 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
HSPG2-211ENST00000486901 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 OR8B3Q8NGG8 313 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 C22orf15Q8WYQ4 148 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 SPOCK3Q9BQ16 436 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 DCHS2Q6V1P9 2916 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 TAS2R45P59539 299 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 TBR1Q16650 682 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 LINC00305Q7Z4B0 112 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 WFDC3Q8IUB2 231 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 RITA1Q96K30 269 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 SAP30LQ9HAJ7 183 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 TMSB15BA0A087X1C1 80 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 MT-ND6P03923 174 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 DDB2Q92466 427 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 TXNDC17Q9BRA2 123 aa10.04□□□□□ -0.8
HSPG2-211ENST00000486901 SMIM27A0A1W2PRY6 76 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms