RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 H0YJW9 148 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
HMGN1-216ENST00000486741 CLEC2AQ6UVW9 174 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 AGMATQ9BSE5 352 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 ZFYVE26Q68DK2 2539 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 CORTO00230 105 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
HMGN1-216ENST00000486741 SRP14P37108 136 aaKnown RBP10.8□□□□□ -0.68
HMGN1-216ENST00000486741 CTAG1AP78358 180 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 Q5PR19 223 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 C19orf35Q6ZS72 473 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 OR1P1Q8NH06 330 aa10.8□□□□□ -0.68
HMGN1-216ENST00000486741 CEACAM4O75871 244 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 ORM1P02763 201 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 C1QL4Q86Z23 238 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 ARL6IP6Q8N6S5 226 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 TLN2Q9Y4G6 2542 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 TNRC6AQ8NDV7 1962 aaKnown RBP10.79□□□□□ -0.68
HMGN1-216ENST00000486741 CA1P00915 261 aaPredicted RBP10.79□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
HMGN1-216ENST00000486741 BPIFA4PQ86YQ2 179 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 OR52E5Q8NH55 327 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 LINC00527Q9UJ94 153 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 AREGP15514 252 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 CA7P43166 264 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 FAM90A2PQ658T7 463 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 WDR73Q6P4I2 378 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 TUBA4BQ9H853 241 aa10.79□□□□□ -0.68
HMGN1-216ENST00000486741 TRAV1-1A0A0B4J248 108 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 SRRM4A7MD48 611 aaKnown RBP10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BKO60814 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 AMY1AP04745 511 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BJP06899 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 GNLYP22749 145 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BOP23527 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 CNTFRP26992 372 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BBP33778 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 LOXL3P58215 753 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BDP58876 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BCP62807 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST2H2BEQ16778 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BHQ93079 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BNQ99877 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HIST1H2BMQ99879 126 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 REV3LO60673 3130 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 THBDP07204 575 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 RPL24P83731 157 aaKnown RBP10.78□□□□□ -0.68
HMGN1-216ENST00000486741 TMEM177Q53S58 311 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 WFDC3Q8IUB2 231 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 PGLYRP4Q96LB8 373 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 A0A087WWC5 75 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 MUC21A0A0G2JKD1 596 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 MUC21A0A140T8X8 626 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 APCSP02743 223 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 STAG3L2P0CL84 134 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 STAG3L3P0CL85 134 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 MFAP4P55083 255 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 MUC21Q5SSG8 566 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 CHODLQ9H9P2 273 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 VENTXO95231 258 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 S100A4P26447 101 aaKnown RBP10.78□□□□□ -0.68
HMGN1-216ENST00000486741 GATA4P43694 442 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 UTF1Q5T230 341 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 HSPB9Q9BQS6 159 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 MYO9AB2RTY4 2548 aa10.78□□□□□ -0.68
HMGN1-216ENST00000486741 COL6A3P12111 3177 aa10.77□□□□□ -0.68
HMGN1-216ENST00000486741 PF4V1P10720 104 aa10.77□□□□□ -0.68
HMGN1-216ENST00000486741 CCKARP32238 428 aa10.77□□□□□ -0.68
HMGN1-216ENST00000486741 USP9YO00507 2555 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-216ENST00000486741 UBE2CO00762 179 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 HOXA5P20719 270 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-216ENST00000486741 NEU4Q8WWR8 484 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-216ENST00000486741 PARD6GQ9BYG4 376 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-216ENST00000486741 IGHV1-3A0A0C4DH29 117 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 GOSR1O95249 250 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 PYY3Q5JQD4 70 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 PRSS3P2Q8NHM4 247 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 C5orf30Q96GV9 206 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.69
HMGN1-216ENST00000486741 SH2D7A6NKC9 451 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-216ENST00000486741 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 SOD3P08294 240 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 SRIP30626 198 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 CFHR2P36980 270 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 GBGT1Q8N5D6 347 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 C5orf17Q8NAS9 161 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 ST6GALNAC3Q8NDV1 305 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 LOXP28300 417 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-216ENST00000486741 FOXA3P55318 350 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-216ENST00000486741 PRSS8Q16651 343 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 RNASEH2CQ8TDP1 164 aaKnown RBP10.76□□□□□ -0.69
HMGN1-216ENST00000486741 YTHDF2Q9Y5A9 579 aaKnown RBP10.76□□□□□ -0.69
HMGN1-216ENST00000486741 SELENOKQ9Y6D0 94 aa10.76□□□□□ -0.69
HMGN1-216ENST00000486741 FAM90A9PA6NNJ1 464 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 M0R2Z0 102 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 NBR2O15453 112 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms