RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 GATAD1Q8WUU5 269 aa15.27■□□□□ 0.04
LMBR1-217ENST00000485985 TMEM231Q9H6L2 316 aa15.27■□□□□ 0.04
LMBR1-217ENST00000485985 RABAC1Q9UI14 185 aa15.27■□□□□ 0.04
LMBR1-217ENST00000485985 RPS10-NUDT3A0A1W2PQS6 291 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 CEBPZOSA8MTT3 80 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 CA1P00915 261 aaPredicted RBP15.26■□□□□ 0.03
LMBR1-217ENST00000485985 TNFSF8P32971 234 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 SUPT4H1P63272 117 aaKnown RBP15.26■□□□□ 0.03
LMBR1-217ENST00000485985 TMEM217Q8N7C4 229 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 STXBP6Q8NFX7 210 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 IL22RA2Q969J5 263 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 RARRES2Q99969 163 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 SOSTQ9BQB4 213 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 KMT2AQ03164 3969 aa15.26■□□□□ 0.03
LMBR1-217ENST00000485985 TRAV30A0A087WSZ9 112 aa15.25■□□□□ 0.03
LMBR1-217ENST00000485985 K7EQG2 157 aa15.25■□□□□ 0.03
LMBR1-217ENST00000485985 SCGB2A1O75556 95 aa15.25■□□□□ 0.03
LMBR1-217ENST00000485985 RBMS2Q15434 407 aaKnown RBP15.25■□□□□ 0.03
LMBR1-217ENST00000485985 NMSQ5H8A3 153 aa15.25■□□□□ 0.03
LMBR1-217ENST00000485985 RNASEH2CQ8TDP1 164 aaKnown RBP15.25■□□□□ 0.03
LMBR1-217ENST00000485985 MCUBQ9NWR8 336 aa15.25■□□□□ 0.03
LMBR1-217ENST00000485985 RSL24D1Q9UHA3 163 aaKnown RBP15.25■□□□□ 0.03
LMBR1-217ENST00000485985 A0A1W2PS18 150 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 SULT1A3P0DMM9 295 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 SULT1A4P0DMN0 295 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 NPY1RP25929 384 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 OR10J1P30954 320 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 OR1S2Q8NGQ3 325 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 OR11H2Q8NH07 326 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 DCANP1Q8TF63 244 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 PHLDA1Q8WV24 401 aaPredicted RBP15.24■□□□□ 0.03
LMBR1-217ENST00000485985 C11orf68Q9H3H3 251 aaKnown RBP15.24■□□□□ 0.03
LMBR1-217ENST00000485985 SCP2D1Q9UJQ7 156 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 U3KQE9 123 aa15.24■□□□□ 0.03
LMBR1-217ENST00000485985 DEDDO75618 318 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 ZNF688P0C7X2 276 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 SLC25A4P12235 298 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 AKR1C4P17516 323 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 LGALS9CQ6DKI2 356 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 LYZL2Q7Z4W2 148 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 MCFD2Q8NI22 146 aa15.23■□□□□ 0.03
LMBR1-217ENST00000485985 FABP12A6NFH5 140 aa15.22■□□□□ 0.03
LMBR1-217ENST00000485985 NOL3O60936 208 aaKnown RBP15.22■□□□□ 0.03
LMBR1-217ENST00000485985 YPEL3P61236 119 aaPredicted RBP15.22■□□□□ 0.03
LMBR1-217ENST00000485985 USF2Q15853 346 aaPredicted RBP15.22■□□□□ 0.03
LMBR1-217ENST00000485985 TRPT1Q86TN4 253 aaKnown RBP15.22■□□□□ 0.03
LMBR1-217ENST00000485985 GLMPQ8WWB7 406 aa15.22■□□□□ 0.03
LMBR1-217ENST00000485985 TRIM63Q969Q1 353 aa15.22■□□□□ 0.03
LMBR1-217ENST00000485985 GRAMD2BQ96HH9 432 aa15.22■□□□□ 0.03
LMBR1-217ENST00000485985 HSPB7Q9UBY9 170 aa15.22■□□□□ 0.03
LMBR1-217ENST00000485985 A0A0B4J2A0 478 aa15.21■□□□□ 0.03
LMBR1-217ENST00000485985 GIG44P09565 113 aaPredicted RBP15.21■□□□□ 0.03
LMBR1-217ENST00000485985 STHQ8IWL8 128 aa15.21■□□□□ 0.03
LMBR1-217ENST00000485985 NPIPB3Q92617 1050 aa15.21■□□□□ 0.03
LMBR1-217ENST00000485985 ACY3Q96HD9 319 aa15.21■□□□□ 0.03
LMBR1-217ENST00000485985 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
LMBR1-217ENST00000485985 SHPKQ9UHJ6 478 aa15.21■□□□□ 0.03
LMBR1-217ENST00000485985 KCNIP3Q9Y2W7 256 aa15.21■□□□□ 0.03
LMBR1-217ENST00000485985 KNCNA6PVL3 124 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 DEFB4AO15263 64 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 IL4P05112 153 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 HNRNPCP07910 306 aaKnown RBP eCLIP15.2■□□□□ 0.022e-6■■■□□ 17.5
LMBR1-217ENST00000485985 C4BPBP20851 252 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 NANOS2P60321 138 aaKnown RBP15.2■□□□□ 0.02
LMBR1-217ENST00000485985 KLF9Q13886 244 aaPredicted RBP15.2■□□□□ 0.02
LMBR1-217ENST00000485985 SMCO1Q147U7 214 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 C16orf54Q6UWD8 224 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 Q8WTZ3 238 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 SCGB3A2Q96PL1 93 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 RBKSQ9H477 322 aa15.2■□□□□ 0.02
LMBR1-217ENST00000485985 DNAH10Q8IVF4 4471 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 IFNA10P01566 189 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 CCR6P51684 374 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 ETFRF1Q6IPR1 90 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 DTD1Q8TEA8 209 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 CACFD1Q9UGQ2 172 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 V9GYH0 126 aa15.19■□□□□ 0.02
LMBR1-217ENST00000485985 TOMM40O96008 361 aa15.18■□□□□ 0.02
LMBR1-217ENST00000485985 DHRS2Q13268 280 aa15.18■□□□□ 0.02
LMBR1-217ENST00000485985 Q8NAQ8 132 aa15.18■□□□□ 0.02
LMBR1-217ENST00000485985 HELTA6NFD8 242 aa15.17■□□□□ 0.02
LMBR1-217ENST00000485985 ZNF79Q15937 498 aa15.17■□□□□ 0.02
LMBR1-217ENST00000485985 LGI3Q8N145 548 aa15.17■□□□□ 0.02
LMBR1-217ENST00000485985 C11orf45Q8TAV5 145 aa15.17■□□□□ 0.02
LMBR1-217ENST00000485985 U3KQ87 197 aa15.17■□□□□ 0.02
LMBR1-217ENST00000485985 HERC2O95714 4834 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 PSG1P11464 419 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 SRPXP78539 464 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 ACTL10Q5JWF8 245 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 TMED4Q7Z7H5 227 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 NOXA1Q86UR1 476 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 FBXL17Q9UF56 701 aa15.16■□□□□ 0.02
LMBR1-217ENST00000485985 BUB3O43684 328 aa15.15■□□□□ 0.02
LMBR1-217ENST00000485985 RD3LP0DJH9 198 aa15.15■□□□□ 0.02
LMBR1-217ENST00000485985 SPP1P10451 314 aa15.15■□□□□ 0.02
LMBR1-217ENST00000485985 ANXA3P12429 323 aa15.15■□□□□ 0.02
LMBR1-217ENST00000485985 EIF2B2P49770 351 aaKnown RBP15.15■□□□□ 0.02
LMBR1-217ENST00000485985 PYDC2Q56P42 97 aa15.15■□□□□ 0.02
LMBR1-217ENST00000485985 PSMG4Q5JS54 123 aa15.15■□□□□ 0.02
LMBR1-217ENST00000485985 OR51G1Q8NGK1 321 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms