RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CXCL2P19875 107 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 OR10J1P30954 320 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 ARL3P36405 182 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 EIF2B2P49770 351 aaKnown RBP13.54□□□□□ -0.24
CHMP3-207ENST00000485465 ZNF345Q14585 488 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 DEFB136Q30KP8 78 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 SHISA2Q6UWI4 295 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 TREML4Q6UXN2 200 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 THAP8Q8NA92 274 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 ATP5SQ99766 215 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 WFDC1Q9HC57 220 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 FBXL17Q9UF56 701 aa13.54□□□□□ -0.24
CHMP3-207ENST00000485465 TENM1Q9UKZ4 2725 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 IGKV1D-37A0A075B6S9 117 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 IGHV4OR15-8A0A075B7B6 117 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 IGKV1OR2-108A0A075B7D4 117 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 A0A087WW49 117 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 A0A0D9SG52 128 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 BMPR1BO00238 502 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 NUPL2O15504 423 aaKnown RBP13.53□□□□□ -0.24
CHMP3-207ENST00000485465 SCGB2A1O75556 95 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 DFFBO76075 338 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 IGLC1P0CG04 106 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 ADMP35318 185 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 KCNRGQ8N5I3 272 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 OR11H1Q8NG94 326 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 OR1N2Q8NGR9 330 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 RAX2Q96IS3 184 aa13.53□□□□□ -0.24
CHMP3-207ENST00000485465 UBE2L5PA0A1B0GUS4 154 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 ZFP92A6NM28 416 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
CHMP3-207ENST00000485465 IGKV1-17P01599 117 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 KRTAP21-3Q3LHN1 58 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 TIGITQ495A1 244 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 TEPPQ6URK8 271 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 DPF1Q92782 380 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 DUX3Q96PT4 197 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 WDR83OSQ9Y284 106 aa13.52□□□□□ -0.25
CHMP3-207ENST00000485465 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.25
CHMP3-207ENST00000485465 LINC01619G3V211 115 aa13.51□□□□□ -0.25
CHMP3-207ENST00000485465 CCL24O00175 119 aa13.51□□□□□ -0.25
CHMP3-207ENST00000485465 OR2C1O95371 312 aa13.51□□□□□ -0.25
CHMP3-207ENST00000485465 ZNF616Q08AN1 781 aa13.51□□□□□ -0.25
CHMP3-207ENST00000485465 LGALSLQ3ZCW2 172 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-207ENST00000485465 TRGV9Q99603 122 aa13.51□□□□□ -0.25
CHMP3-207ENST00000485465 TAAR5O14804 337 aa13.5□□□□□ -0.25
CHMP3-207ENST00000485465 IFNA5P01569 189 aa13.5□□□□□ -0.25
CHMP3-207ENST00000485465 ZP3P21754 424 aa13.5□□□□□ -0.25
CHMP3-207ENST00000485465 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
CHMP3-207ENST00000485465 RELQ04864 619 aaPredicted RBP13.5□□□□□ -0.25
CHMP3-207ENST00000485465 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
CHMP3-207ENST00000485465 TMUB2Q71RG4 321 aa13.5□□□□□ -0.25
CHMP3-207ENST00000485465 IGHV3-35A0A0C4DH35 117 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 FGF7P21781 194 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 HOXD3P31249 432 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-207ENST00000485465 MYCNOSP40205 109 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 NKX2-5P52952 324 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-207ENST00000485465 ZNF90Q03938 601 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 RAB31Q13636 194 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 FHL3Q13643 280 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 ZNF266Q14584 549 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 C9orf62Q8N4C0 152 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 ZNF414Q96IQ9 312 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 MGST2Q99735 147 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 ARPC5LQ9BPX5 153 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 PARD6GQ9BYG4 376 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-207ENST00000485465 WDR61Q9GZS3 305 aaKnown RBP13.49□□□□□ -0.25
CHMP3-207ENST00000485465 ARL6Q9H0F7 186 aa13.49□□□□□ -0.25
CHMP3-207ENST00000485465 AGPAT2O15120 278 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 BCL2L11O43521 198 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 MPDU1O75352 247 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 TOMM40O96008 361 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 FABP1P07148 127 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 RD3LP0DJH9 198 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 SLURP1P55000 103 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 LAMTOR1Q6IAA8 161 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 CYP2G1PQ6ZSU1 146 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 OR4F17Q8NGA8 305 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 SCGB1C1Q8TD33 95 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 OR4F4Q96R69 305 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 COL6A5A8TX70 2615 aa13.48□□□□□ -0.25
CHMP3-207ENST00000485465 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
CHMP3-207ENST00000485465 KANTRA0A1W2PQU2 76 aa13.47□□□□□ -0.25
CHMP3-207ENST00000485465 PSG1P11464 419 aa13.47□□□□□ -0.25
CHMP3-207ENST00000485465 CAMLGP49069 296 aa13.47□□□□□ -0.25
CHMP3-207ENST00000485465 KLF5Q13887 457 aaPredicted RBP13.47□□□□□ -0.25
CHMP3-207ENST00000485465 RPL7L1Q6DKI1 246 aaKnown RBP13.47□□□□□ -0.25
CHMP3-207ENST00000485465 Q8WTZ3 238 aa13.47□□□□□ -0.25
CHMP3-207ENST00000485465 SLC45A2Q9UMX9 530 aa13.47□□□□□ -0.25
CHMP3-207ENST00000485465 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
CHMP3-207ENST00000485465 BOLA2-SMG1P6H3BVE0 249 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 NDUFA4O00483 81 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 JTBO76095 146 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 SELENOTP62341 195 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms