RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PNMA8CA0A1B0GUJ8 204 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 CBY3A6NI87 242 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 FOXI3A8MTJ6 420 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 FAM90A26D6RGX4 464 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 I3L2K1 104 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 SIVA1O15304 175 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 DIRAS3O95661 229 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 MT-CO2P00403 227 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 CDK1P06493 297 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 IGKV1-13P0DP09 117 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 NFYAP23511 347 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 RFX2P48378 723 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 HOXA1P49639 335 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 ETV1P50549 477 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 RASSF2P50749 326 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 MRPS15P82914 257 aaKnown RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 SSX1Q16384 188 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 ACSM3Q53FZ2 586 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 THOC7Q6I9Y2 204 aaKnown RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 TMPRSS11AQ6ZMR5 421 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 ZNF600Q6ZNG1 722 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 NFE4Q86UQ8 179 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 FAM89BQ8N5H3 189 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 OR4C16Q8NGL9 310 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 RXFP4Q8TDU9 374 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 LSM10Q969L4 123 aaKnown RBP3.58□□□□□ -1.84
PTPN4-210ENST00000485247 PGLYRP3Q96LB9 341 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 METTL26Q96S19 204 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 FAM107BQ9H098 131 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 GABARAPL1Q9H0R8 117 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 BABAM2Q9NXR7 383 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 ARL2BPQ9Y2Y0 163 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
PTPN4-210ENST00000485247 IGKV1D-8A0A087WSZ0 117 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 TCRBV3S1A0A5B6 114 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 EBAG9O00559 213 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 RS1O15537 224 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 TNFSF12O43508 249 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 SLC22A5O76082 557 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 HLA-DQB1P01920 261 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 M6PRP20645 277 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 CRYBB3P26998 211 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 EIF2B2P49770 351 aaKnown RBP3.57□□□□□ -1.84
PTPN4-210ENST00000485247 TAS2R31P59538 309 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 PSG9Q00887 426 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 FLOT2Q14254 428 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 P2RY14Q15391 338 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 KCTD21Q4G0X4 260 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 C1orf100Q5SVJ3 147 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 TMEM268Q5VZI3 342 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 SPAG16Q8N0X2 631 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 DMBX1Q8NFW5 382 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 OR1L8Q8NGR8 309 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 OR1P1Q8NH06 330 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 NARS2Q96I59 477 aaKnown RBP3.57□□□□□ -1.84
PTPN4-210ENST00000485247 DCSTAMPQ9H295 470 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 NDUFA4L2Q9NRX3 87 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 KCNK7Q9Y2U2 307 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 NSG2Q9Y328 171 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 OR2W1Q9Y3N9 320 aa3.57□□□□□ -1.84
PTPN4-210ENST00000485247 A0A075B6Q4 140 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 PLAC8L1A1L4L8 177 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 GAGE10A6NGK3 116 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 SULT1C2O00338 296 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 HPRT1P00492 218 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 C1QBP02746 253 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 NQO2P16083 231 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 GABRB1P18505 474 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 AZU1P20160 251 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 NPBWR1P48145 328 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 AP2S1P53680 142 aaPredicted RBP3.56□□□□□ -1.84
PTPN4-210ENST00000485247 INSL4Q14641 139 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 POU2AF1Q16633 256 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 LELP1Q5T871 98 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 Q6ZSA8 131 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 CADM3Q8N126 398 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 TMEM230Q96A57 120 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 LINC00052Q96N35 136 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 SAV1Q9H4B6 383 aaPredicted RBP3.56□□□□□ -1.84
PTPN4-210ENST00000485247 NRN1Q9NPD7 142 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 CLEC2DQ9UHP7 191 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 OR51B2Q9Y5P1 312 aa3.56□□□□□ -1.84
PTPN4-210ENST00000485247 F6UB75 175 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 ZNF701M0R085 212 aaPredicted RBP3.55□□□□□ -1.84
PTPN4-210ENST00000485247 DENRO43583 198 aaKnown RBP3.55□□□□□ -1.84
PTPN4-210ENST00000485247 NXPH4O95158 308 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 TMEM50AO95807 157 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 TALDO1P37837 337 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 NKX2-1P43699 371 aaPredicted RBP3.55□□□□□ -1.84
PTPN4-210ENST00000485247 RORCP51449 518 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
PTPN4-210ENST00000485247 PAX9P55771 341 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 ST3GAL4Q11206 333 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 FAM78BQ5VT40 261 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 C16orf54Q6UWD8 224 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 FOXI2Q6ZQN5 318 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms