RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ZNF106Q9H2Y7 1883 aaKnown RBP1.53□□□□□ -2.16
SMC4-215ENST00000484799 BOLA2Q9H3K6 86 aa1.53□□□□□ -2.16
SMC4-215ENST00000484799 LYRM2Q9NU23 88 aaPredicted RBP1.53□□□□□ -2.16
SMC4-215ENST00000484799 PRNDQ9UKY0 176 aa1.53□□□□□ -2.16
SMC4-215ENST00000484799 LHFPL6Q9Y693 200 aa1.53□□□□□ -2.16
SMC4-215ENST00000484799 DOCK10Q96BY6 2186 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 MED1Q15648 1581 aaPredicted RBP1.52□□□□□ -2.17
SMC4-215ENST00000484799 KIF24Q5T7B8 1368 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 TMEM212A6NML5 194 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 IBA57-AS1B1ANH7 110 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 H7C1C5 153 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 IGKV1-16P04430 117 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 RPSAP08865 295 aaKnown RBP1.52□□□□□ -2.17
SMC4-215ENST00000484799 PHBP35232 272 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 SRP14P37108 136 aaKnown RBP1.52□□□□□ -2.17
SMC4-215ENST00000484799 GNG10P50151 68 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 NCALDP61601 193 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 LCN6P62502 163 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 RHOBP62745 196 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 EIF5AP63241 154 aaKnown RBP1.52□□□□□ -2.17
SMC4-215ENST00000484799 TSNQ15631 228 aaKnown RBP1.52□□□□□ -2.17
SMC4-215ENST00000484799 RRN3P1Q2M238 152 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 TRIQKQ629K1 86 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 OR8D4Q8NGM9 314 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 NEK7Q8TDX7 302 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 YPEL2Q96QA6 119 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 TMEM133Q9H2Q1 129 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 BIN3Q9NQY0 253 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 GID8Q9NWU2 228 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 SSR3Q9UNL2 185 aa1.52□□□□□ -2.17
SMC4-215ENST00000484799 UTP11Q9Y3A2 253 aaKnown RBP1.52□□□□□ -2.17
SMC4-215ENST00000484799 C1orf196B1AJZ1 125 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 CLDN25C9JDP6 229 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 GGCTO75223 188 aaKnown RBP1.51□□□□□ -2.17
SMC4-215ENST00000484799 GPX2P18283 190 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 GNG3P63215 75 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 NNATQ16517 81 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 BCL2L15Q5TBC7 163 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 FAM173BQ6P4H8 233 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 COA5Q86WW8 74 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.51□□□□□ -2.17
SMC4-215ENST00000484799 ZHX1-C8orf76Q96EF9 292 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 MALSU1Q96EH3 234 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 PBDC1Q9BVG4 233 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 PBOV1Q9GZY1 135 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 ACER3Q9NUN7 267 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 TAS2R4Q9NYW5 299 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 AMMECR1Q9Y4X0 333 aaPredicted RBP1.51□□□□□ -2.17
SMC4-215ENST00000484799 VWDEQ8N2E2 1590 aa1.51□□□□□ -2.17
SMC4-215ENST00000484799 UHRF1BP1Q6BDS2 1440 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 YTHDC2Q9H6S0 1430 aaKnown RBP1.5□□□□□ -2.17
SMC4-215ENST00000484799 CCDC88AQ3V6T2 1871 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 GBF1Q92538 1859 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 STRCQ7RTU9 1775 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 TRGV10A0A0A0MS01 117 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 OVOL1O14753 267 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 APOA2P02652 100 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 CTSDP07339 412 aaPredicted RBP1.5□□□□□ -2.17
SMC4-215ENST00000484799 BAALC-AS2P0C853 105 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 SRIP30626 198 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 DEFA3P59666 94 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 Q1T7F1 81 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 PCOTHQ58A44 107 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 Q6ZQT0 140 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 PHF13Q86YI8 300 aaPredicted RBP1.5□□□□□ -2.17
SMC4-215ENST00000484799 C9orf163Q8N9P6 203 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 CANT1Q8WVQ1 401 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 SLAMF6Q96DU3 332 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 SELENOSQ9BQE4 189 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 CENPHQ9H3R5 247 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 SLC35A3Q9Y2D2 325 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 CCDC88CQ9P219 2028 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 SYNMO15061 1565 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 GLI3P10071 1580 aa1.5□□□□□ -2.17
SMC4-215ENST00000484799 UBR2Q8IWV8 1755 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 IGKV1-9A0A0C4DH69 117 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 PPP5D1E7EU14 171 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 SHBGP04278 402 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 MIFP14174 115 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 G0S2P27469 103 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 TAS2R41P59536 307 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 GNG5P63218 68 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 C3orf33Q6P1S2 294 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 GRINAQ7Z429 371 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 OR52R1Q8NGF1 315 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 OR13D1Q8NGV5 346 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 OR2T10Q8NGZ9 312 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 WFDC5Q8TCV5 224 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 ADAT3Q96EY9 351 aaPredicted RBP1.49□□□□□ -2.17
SMC4-215ENST00000484799 GPER1Q99527 375 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 HOPXQ9BPY8 73 aaPredicted RBP1.49□□□□□ -2.17
SMC4-215ENST00000484799 TRABDQ9H4I3 376 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 ATPIF1Q9UII2 106 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 UNC13AQ9UPW8 1703 aa1.49□□□□□ -2.17
SMC4-215ENST00000484799 SBF1O95248 1867 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 TRGV2A0A075B6R0 118 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 DUXBA0A1W2PPF3 345 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 TAX1BP3O14907 124 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 BANF1O75531 89 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 PROSCO94903 275 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms