RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 RYR2Q92736 4967 aa11.24□□□□□ -0.61
HLA-F-226ENST00000484704 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
HLA-F-226ENST00000484704 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 CD5P06127 495 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 IAPPP10997 89 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 OR10J1P30954 320 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
HLA-F-226ENST00000484704 RAB11AP62491 216 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
HLA-F-226ENST00000484704 C4orf46Q504U0 113 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 WFDC3Q8IUB2 231 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 OR1S2Q8NGQ3 325 aa11.23□□□□□ -0.61
HLA-F-226ENST00000484704 MRPL36Q9P0J6 103 aaKnown RBP11.23□□□□□ -0.61
HLA-F-226ENST00000484704 DYNC2H1Q8NCM8 4307 aaKnown RBP11.23□□□□□ -0.61
HLA-F-226ENST00000484704 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
HLA-F-226ENST00000484704 LCE6AA0A183 80 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 RBMY1BA6NDE4 496 aaKnown RBP11.22□□□□□ -0.61
HLA-F-226ENST00000484704 RBMY1EA6NEQ0 496 aaKnown RBP11.22□□□□□ -0.61
HLA-F-226ENST00000484704 IFNA21P01568 189 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 RBMY1DP0C7P1 496 aaKnown RBP11.22□□□□□ -0.61
HLA-F-226ENST00000484704 LYL1P12980 280 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 ST8SIA2Q92186 375 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 NPIPB3Q92617 1050 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 ZFAND3Q9H8U3 227 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 RETNQ9HD89 108 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 FLVCR2Q9UPI3 526 aa11.22□□□□□ -0.61
HLA-F-226ENST00000484704 C9orf170A2RU37 121 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 FAM90A26D6RGX4 464 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 WRBO00258 174 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 OR4E1P0C645 316 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 SLC25A6P12236 298 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 EIF2B2P49770 351 aaKnown RBP11.21□□□□□ -0.61
HLA-F-226ENST00000484704 APOC4P55056 127 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
HLA-F-226ENST00000484704 CNPY1Q3B7I2 92 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 GGNBP1Q5YKI7 109 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 ZFAND6Q6FIF0 208 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 LINC00322Q6ZN03 302 aaPredicted RBP11.21□□□□□ -0.61
HLA-F-226ENST00000484704 CIB3Q96Q77 187 aaPredicted RBP11.21□□□□□ -0.61
HLA-F-226ENST00000484704 CITED4Q96RK1 184 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 RABAC1Q9UI14 185 aa11.21□□□□□ -0.61
HLA-F-226ENST00000484704 ZFP92A6NM28 416 aa11.2□□□□□ -0.62
HLA-F-226ENST00000484704 DFFBO76075 338 aa11.2□□□□□ -0.62
HLA-F-226ENST00000484704 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-226ENST00000484704 IGLC1P0CG04 106 aa11.2□□□□□ -0.62
HLA-F-226ENST00000484704 LYG2Q86SG7 212 aa11.2□□□□□ -0.62
HLA-F-226ENST00000484704 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
HLA-F-226ENST00000484704 MAGT1Q9H0U3 335 aa11.2□□□□□ -0.62
HLA-F-226ENST00000484704 SACSQ9NZJ4 4579 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 SYNGR2O43760 224 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 IGKV1-17P01599 117 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 IL4P05112 153 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 RD3LP0DJH9 198 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 ANXA7P20073 488 aaKnown RBP11.19□□□□□ -0.62
HLA-F-226ENST00000484704 YPEL3P61236 119 aaPredicted RBP11.19□□□□□ -0.62
HLA-F-226ENST00000484704 ODF3L2Q3SX64 289 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
HLA-F-226ENST00000484704 LYRM1O43325 122 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 PITX3O75364 302 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 FABP1P07148 127 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
HLA-F-226ENST00000484704 RPL35AP18077 110 aaKnown RBP11.18□□□□□ -0.62
HLA-F-226ENST00000484704 GPX4P36969 197 aaPredicted RBP11.18□□□□□ -0.62
HLA-F-226ENST00000484704 P2RY1P47900 373 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 DHRS2Q13268 280 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 STXBP6Q8NFX7 210 aa11.18□□□□□ -0.62
HLA-F-226ENST00000484704 ADAP1O75689 374 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 SCGB1D2O95969 90 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 TOMM40O96008 361 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 CRYBB3P26998 211 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 SPANXN5Q5MJ07 72 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 FAM90A2PQ658T7 463 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 CCDC32Q9BV29 185 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 PBDC1Q9BVG4 233 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 MS4A6AQ9H2W1 248 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 PFDN2Q9UHV9 154 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
HLA-F-226ENST00000484704 HELTA6NFD8 242 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 BTCP35070 178 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 NKX2-1P43699 371 aaPredicted RBP11.16□□□□□ -0.62
HLA-F-226ENST00000484704 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 OR51G1Q8NGK1 321 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 S100ZQ8WXG8 99 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 PPP1R14BQ96C90 147 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
HLA-F-226ENST00000484704 STRAPQ9Y3F4 350 aaKnown RBP11.16□□□□□ -0.62
HLA-F-226ENST00000484704 TRAV6A0A075B6T7 132 aa11.15□□□□□ -0.62
HLA-F-226ENST00000484704 H3BP45 60 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms