RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 DEFB128Q7Z7B8 93 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 LRRC28Q86X40 367 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-211ENST00000484581 ADAT3Q96EY9 351 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-211ENST00000484581 SERPINI1Q99574 410 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 TTTY12Q9BZ98 90 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 EPDR1Q9UM22 224 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 SLC35A3Q9Y2D2 325 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 OBSL1O75147 1896 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 COL4A2P08572 1712 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 DENND4CQ5VZ89 1909 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 PLXNA3P51805 1871 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 IGKV1-9A0A0C4DH69 117 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 RIIAD1A6NNX1 92 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 H3BRN7 92 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 BANF1O75531 89 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 SRP14P37108 136 aaKnown RBP2.1□□□□□ -2.07
VPS13A-211ENST00000484581 AKAP14Q86UN6 197 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 TAC4Q86UU9 113 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 DHFR2Q86XF0 187 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 NUP35Q8NFH5 326 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 OR8B3Q8NGG8 313 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 OR5A1Q8NGJ0 315 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 PLEKHB2Q96CS7 222 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 DOCK4Q8N1I0 1966 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 CCDC88CQ9P219 2028 aa2.1□□□□□ -2.07
VPS13A-211ENST00000484581 ADGRB3O60242 1522 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 TMEM212A6NML5 194 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 H3BQV1 296 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 J3QRE1 110 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 TAX1BP3O14907 124 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 ORC5O43913 435 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 PGLYRP1O75594 196 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-211ENST00000484581 APOA2P02652 100 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 CRHP06850 196 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 GLRXP35754 106 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 AQP4P55087 323 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 SLC38A11Q08AI6 406 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 KHDC3LQ587J8 217 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 TMEM78Q5T7P6 136 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 DCUN1D2Q6PH85 259 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 Q6ZQT0 140 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 FAM24BQ8N5W8 94 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 WFDC11Q8NEX6 87 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 STAG3L4Q8TBR4 150 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 YPEL2Q96QA6 119 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 HIST1H2BLQ99880 126 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 HSPB9Q9BQS6 159 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 TXNDC17Q9BRA2 123 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 C8orf4Q9NR00 106 aa2.09□□□□□ -2.07
VPS13A-211ENST00000484581 UBR2Q8IWV8 1755 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 RTTNQ86VV8 2226 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 GNG14A0A1W2PPG7 69 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 C7orf71A4D174 169 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 MAP1LC3B2A6NCE7 125 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 IBA57-AS1B1ANH7 110 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 M0R378 163 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 SDCBPO00560 298 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-211ENST00000484581 PMP2P02689 132 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 ZNF345Q14585 488 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 AAED1Q7RTV5 226 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 OR4E2Q8NGC2 313 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 CANT1Q8WVQ1 401 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 MAP1LC3BQ9GZQ8 125 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 EML6Q6ZMW3 1958 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 KIF24Q5T7B8 1368 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 ANKRD30AQ9BXX3 1397 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 RIC1Q4ADV7 1423 aa2.08□□□□□ -2.08
VPS13A-211ENST00000484581 MED1Q15648 1581 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-211ENST00000484581 TRIOBPQ9H2D6 2365 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 CST8O60676 142 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 PFDN1O60925 122 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 PIAS1O75925 651 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 C1QCP02747 245 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 CSN2P05814 226 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 P0DMU3 169 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 FAM231AP0DMU4 169 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 FAM231CP0DMU5 169 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 CRYGAP11844 174 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 RNASE4P34096 147 aaKnown RBP2.07□□□□□ -2.08
VPS13A-211ENST00000484581 PSMD8P48556 350 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 NNATQ16517 81 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 BCL2L15Q5TBC7 163 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 C9orf163Q8N9P6 203 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 OR13D1Q8NGV5 346 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 DCANP1Q8TF63 244 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 OR2J1Q9GZK6 312 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 NHP2Q9NX24 153 aaKnown RBP2.07□□□□□ -2.08
VPS13A-211ENST00000484581 PCTPQ9UKL6 214 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 COL5A1P20908 1838 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-211ENST00000484581 UHRF1BP1Q6BDS2 1440 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 CUL9Q8IWT3 2517 aa2.07□□□□□ -2.08
VPS13A-211ENST00000484581 GGCTO75223 188 aaKnown RBP2.06□□□□□ -2.08
VPS13A-211ENST00000484581 CTSDP07339 412 aaPredicted RBP2.06□□□□□ -2.08
VPS13A-211ENST00000484581 OGNP20774 298 aaKnown RBP2.06□□□□□ -2.08
VPS13A-211ENST00000484581 NFYBP25208 207 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 TMEM155Q4W5P6 130 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 OR4D11Q8NGI4 311 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 OR10K1Q8NGX5 313 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 TEX37Q96LM6 180 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms