RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 TDRD6O60522 2096 aaKnown RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 RP1P56715 2156 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 TRAV9-2A0A087WT02 112 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV1-69-2A0A0G2JMI3 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 A0A0G2JMM0 328 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 TRBV6-1A0A0K0K1D8 114 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 A0A1W2PPB8 328 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 A0A1W2PRS3 328 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 hDV102S1A0JD36 115 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM89A2RUT3 159 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 KIR3DP1A8MWS1 328 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 SRRM5B3KS81 715 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 HSBP1L1C9JCN9 74 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 K7EP13 123 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 M0R1X1 148 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 CORTO00230 105 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 TIMM8AO60220 97 aaPredicted RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 RAMP3O60896 148 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 RHBDL1O75783 438 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 GAGE7O76087 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 IGLV1-44P01699 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 IGHG3P01860 377 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 HLA-DRB1P01911 266 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 SNRPCP09234 159 aaKnown RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 IGLC2P0DOY2 106 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 IGLC3P0DOY3 106 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 CCL4P13236 92 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 PRDX2P32119 198 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 MPV17P39210 176 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 CTRLP40313 264 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 ATP5G3P48201 142 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 AMTP48728 403 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 RPL30P62888 115 aaKnown RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 ERHP84090 104 aaKnown RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 PRCDQ00LT1 54 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 PAX2Q02962 417 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 Q0VFX4 171 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 PSG7Q13046 419 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 GAGE4Q13068 117 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 ODF3L2Q3SX64 289 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 SAPCD1Q5SSQ6 148 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 IBA57Q5T440 356 aaKnown RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 Q6AWC8 147 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 OR4A47Q6IF82 309 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 C12orf54Q6X4T0 127 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM136Q6ZRR5 245 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 MDS2Q8NDY4 140 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF738Q8NE65 137 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 SLC25A40Q8TBP6 338 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 KLF14Q8TD94 323 aaPredicted RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 C22orf15Q8WYQ4 148 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 COQ2Q96H96 371 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 CYYR1Q96J86 154 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 SGK494Q96LW2 274 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF488Q96MN9 340 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 MS4A6AQ9H2W1 248 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 LPAR2Q9HBW0 351 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 NRN1Q9NPD7 142 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 PSG11Q9UQ72 335 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 LAMTOR2Q9Y2Q5 125 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 AMMECR1Q9Y4X0 333 aaPredicted RBP3.83□□□□□ -1.8
SSBP1-211ENST00000484178 TRANK1O15050 2925 aa3.83□□□□□ -1.8
SSBP1-211ENST00000484178 SEC16AO15027 2179 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV2-26A0A0B4J1V2 119 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 TRAV38-1A0A0B4J264 116 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 KBTBD11-OT1A0A1B0GTJ5 212 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 FBLL1A6NHQ2 334 aaKnown RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 A8MWL6 223 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CRXO43186 299 aaPredicted RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 HSBP1O75506 76 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 IGKV3-20P01619 116 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV3-9P01782 118 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 APOA2P02652 100 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CD59P13987 128 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CBLN1P23435 193 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CHRNB4P30926 498 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 S100A7P31151 101 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 MAGEA5P43359 124 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CCL11P51671 97 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 BRWD1-AS2P59051 145 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 UBE2G2P60604 165 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 MRPS11P82912 194 aaKnown RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 SRYQ05066 204 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 MEF2CQ06413 473 aaPredicted RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 AESQ08117 197 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 OR5I1Q13606 314 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 PSG5Q15238 335 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 GUSBP1Q15486 140 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 PRSS8Q16651 343 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 IZUMO4Q1ZYL8 232 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 SPATA45Q537H7 98 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 LEMD1Q68G75 181 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 MRPL54Q6P161 138 aaKnown RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 WDR82Q6UXN9 313 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms