RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 NDUFB2O95178 105 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF682O95780 498 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 CFDP00746 253 aaPredicted RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 TRACP01848 142 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 MT-ND6P03923 174 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SHBGP04278 402 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 EIF4EP06730 217 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 P0DMU3 169 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 FAM231AP0DMU4 169 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 FAM231CP0DMU5 169 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 FABP2P12104 132 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 IL3RAP26951 378 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 CA7P43166 264 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 RND2P52198 227 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 POLR2JP52435 117 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 FKBP1AP62942 108 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SLC38A11Q08AI6 406 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 MOBPQ13875 183 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 LGALSLQ3ZCW2 172 aaPredicted RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 PSMG4Q5JS54 123 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 C9orf153Q5TBE3 101 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 FKBP1CQ5VVH2 108 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 TMEM236Q5W0B7 351 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 Q6AWC8 147 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 LCN8Q6JVE9 175 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 HRCT1Q6UXD1 115 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 TMEM14EPQ6UXP3 125 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 CLEC19AQ6UXS0 136 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 ALKAL1Q6UXT8 129 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 HEPN1Q6WQI6 88 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 TEX43Q6ZNM6 134 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 Q6ZRU5 148 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 DAZ4Q86SG3 579 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 PCP2Q8IVA1 136 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SLC25A45Q8N413 288 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 LINC00301Q8NCQ3 95 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 LY6G5BQ8NDX9 201 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 OR10G2Q8NGC3 310 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 OR4A5Q8NH83 315 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SGMS2Q8NHU3 365 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 GEMIN6Q8WXD5 167 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 TSLPQ969D9 159 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 MAL2Q969L2 176 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 S100A16Q96FQ6 103 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 YPEL4Q96NS1 127 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SDF2Q99470 211 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SPIN2AQ99865 258 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SPIN2BQ9BPZ2 258 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 SLIRPQ9GZT3 109 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 LINC00597Q9H2U6 94 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 ST20Q9HBF5 79 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 DAZ1Q9NQZ3 744 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 TMEM242Q9NWH2 141 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 LINC00527Q9UJ94 153 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 RPUSD1Q9UJJ7 312 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF443Q9Y2A4 671 aaPredicted RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 ZNF257Q9Y2Q1 563 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 CHCHD2Q9Y6H1 151 aaPredicted RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 CHD5Q8TDI0 1954 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 EPRSP07814 1512 aaKnown RBP1.33□□□□□ -2.2
ITGB1-213ENST00000484088 ZFYVE16Q7Z3T8 1539 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 DUOX2Q9NRD8 1548 aa1.33□□□□□ -2.2
ITGB1-213ENST00000484088 BLMP54132 1417 aaPredicted RBP1.32□□□□□ -2.2
ITGB1-213ENST00000484088 PTPRKQ15262 1439 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 ANKARQ7Z5J8 1434 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 PRG4Q92954 1404 aaPredicted RBP1.32□□□□□ -2.2
ITGB1-213ENST00000484088 ERVK-7P63135 1459 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 RPRD2Q5VT52 1461 aaKnown RBP1.32□□□□□ -2.2
ITGB1-213ENST00000484088 ABCC3O15438 1527 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 MAGI3Q5TCQ9 1506 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 CLASP1Q7Z460 1538 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 ABCC2Q92887 1545 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 KIF1BO60333 1816 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 TRAV12-2A0A075B6T6 113 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 SMIM26A0A096LP01 95 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 TRAV8-3A0A0A6YYJ7 113 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 IGHV2-26A0A0B4J1V2 119 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 TRAV13-1A0A0B4J241 112 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 IGHV3OR16-9A0A0B4J2B5 98 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 IGHV1-58A0A0C4DH39 117 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 A0A0D9SFI3 127 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 TRBV7-6A0A0J9YX20 115 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 ODAMA1E959 279 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 C7orf66A4D0T2 115 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 C7orf77A4D0Y5 90 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 C5orf63A6NC05 138 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 LRCOL1A6NCL2 159 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 IZUMO1RA6ND01 250 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 MCRIP1C9JLW8 97 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 H3BMG7 143 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 H3BRM9 83 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 GABARAPH6UMI1 98 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 J3QQQ9 107 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 LGALS9O00182 355 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 SLC37A4O43826 429 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 SSSCA1O60232 199 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 YPEL1O60688 119 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 HIST1H2BKO60814 126 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 PITX3O75364 302 aa1.32□□□□□ -2.2
ITGB1-213ENST00000484088 WISP3O95389 354 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms